Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1083 ATGACTACTAATTCACCACTTTTCGCCGGAAAAACCCTCCGGCGCCGCCCTCCTCCGGTGGCTCTCCTCCTCCTCCTCCTCCTCTGTTCATTTCCCATCTCCTCCTCCTATGGCGATGAACTTCAGCCACTTTTGGACCTCAAGTCTTCCCTTCATCAGAACTCAATCTACTCCTCCTCCTCTTTGGTTTTTAGCTCTTGGATTAGAGGGAAAGATGTTTGCAGCAGCTTCCATGGAATTGTCTGCGATTCCAATGGCTTTGTTGTGGAAATCAATCTTTCTTCTCTTAACTTATCTGGGGTTCTTCCTTTTGATTCCATTTGCTCCTCTTTCAAATCTCTTCAGAAGCTGTCTTTTGGGTCTAATTCTTTGTATGGGAATGTCAGTCATGGGTTGAGGAACTGTTCCAGCTTGAAGCATTTGGATTTGGGTCAGAATTCCTTTTCTGGTCAACTTCCTGATTTGTCTTCTTTAAAGGAATTGAGGTTCTTGAATTTGAATAACAGTGGCTTTTCTGGGGATTTTCCTTGGAAATCTCTTCTCAATCTTACTCATTTGGTGTTCTTGAGCCTTGGAGACAATTCATTTAACCCAACAACTTCTTTCCCATCACAGATTCTTGAGCTCAAGAATCTTTATTGGCTTTATCTCTCTAATTGCAGCATTCATGGAGAAATCCCACCTGGGATTGGGAATCTCTCTCTGCTTCAGAATCTTGAACTCTCACAGAATCAACTTACAGGTGGAATTCCTTCTGAGATTGTCAACCTCAAGAAGCTATGGCAGCTCGAGTTACATGAGAATTTGCTGACCGGCAAGCTTCCGCTCGGGTTCGGTAACCTCACTGGACTGAGGAAGTTTGATGCCTCTATTAATAATCTTGAAGGTGATCTGATGGAGTTGAGGTTCTTGACCAATCTGGAGTCCTTGCAGCTCTTTCAAAACCGATTTTCCGGTACCATTCCGGAGGAGTTTGGGGACTTTAAAGAGCTTGTTGGACTTTCTCTTTACCAGAACAAGCTCACTGGCAGCCTCCCTCAAAGAATTGGATCTTGGGCAGCCTTCATTTTCATTGATGTTTCTGAGAACTTCCTAACTGGACCTATACCTCCAGACATGTGCAAGCAGGGTACTATGACTGATCTCCTGATGCTGCAAAACAGTTTCATTGGTGGAATCCCGGAAAGCTACACAAAATGTAAATCTTTGAACCGGTTTCGGGTGAATAATAACTCTCTTTCGGGTGTTGTTCCATATGGGATTTGGAGTCTGCCAAATCTTACCATCATTGACCTTTCAATGAATCAGTTTGAAGGTCCTGTGACTTCAGATATTGGTAAGGCGAAAGCTCTTGCCCAGTTATTCTTATCGAATAACCAGTTTTCTGGAAACTTACCAGCCGAGCTTGGCGAAGTATCATCCTTAATCTCGATCCAGCTCGATTCGAACCAATTTGTTGGTCCAATACCAGAATCACTTGGCAAGTTGAAGGACTTGAGCAGCCTTTCTTTGAATGACAACAAGTTTTCTGACAACATTCCTAGCTCATTAGGCTCTTGCACTTCTCTTTCTACCATAAATCTAGCTACGAATTCATTCTCCGGGCGTATTCCAGAGAATCTTGGATATTTGCCAATTCTAAACTCCTTAAATCTGTCGAACAATGAACTTTCAGGTGAAATTCCAATGAGTTTTTCGCAGTTGAAGCTAAGCAGTTTCGATCTGTCTAATAACAGGTTAATTGGGGAAGTACCTGAATCACTAGCAATCGAAGCCTTTGATGAAAGTTTCATGGGAAATCCAGGCTTGTGCAGTGAGTCTCTCAGATACTTGAGTTCATGTTCATCAACCTCTAGATCATCCAGCCATCTCAGAACGTTGCTGTCATGTACCATTGCTGGAATCCTCGTGTTGCTCGTGTCCTCCTCGTGCTTGTTGTTTATTAAATGGAAACGCAACGATGCTAAGCATTTACTGAAATCCCGATCGTGGGATATGAAGCCATTCCACATAGTGTGCTTCACGGAAAAGGAAATCATTGATTCGATCAATTCTGGGAACTTGATAGGCAAAGGAGGATCCGGAAATGTATACAAAGTTGTACTAAGTAATGGCAAAGAACTCGCTGTGAAACATATATGGCAGTCAAGCTCCAGGGACCAAACAAATTATCAAACCAGCGCAACCATGTTAACCAAAAGAATGACCAGGTCATCCGAATATGATGCAGAAGTAGCTACATTGAGTTCAGTGAGGCATGTCAATGTGGTGAAACTATACTGTAGCATTTCGAGCGAGGATAGTAATCTGTTGGTTTATGAATACTTACCGAATGGAAGTTTATGGGATCAGCTGCACACTGGCAGGAAGATTGAGATGGGATGGCAGATACGGTATGAGGTTGCGATTGGAGCAGCAAGGGGCCTCGAATATTTGCATCATGGGTGTGACCGACCAGTGATTCACCGAGATGTGAAGTCAAGTAATATTTTGTTGGACAGTGATTGGAAGCCTAGGATTGCAGATTTCGGGCTAGCTAAGATCCTGCAGGATGGCTGCGGGAGTGGAGATTCGTCTCATGTCATTGCTGGAACACTCGGTTATCTAGCCCCTGAATATGCATACACGTGCAAGATAAACGAGAAGAGCGACGTCTACAGCTTCGGAGTAGTCCTAATGGAACTAGTAACAGGAAAGAAGCCAAATGAGCCAGAGTTTGGGGAGAACAAAGACATTGTACAGTGGGCACACAGCAAAATGAGAGACCTAAAAGGCAATCTGAAAGATATGGTAGATTCTAGCATCTCGGAAGCTCAGGGGGAAGATGCCATCAAAGTGTTGAGAATTGCACTTCGCTGCACGGCTAAGATTCCGTCTACAAGGCCCTCCATGAGAATGGTAGTTCATATGCTTGAAGAGGCTGAACCTTATAATCTCATTGACATTGTTGTCAAGAAAGAATGTGAAAAGTAA 2973 43.49 MTTNSPLFAGKTLRRRPPPVALLLLLLLCSFPISSSYGDELQPLLDLKSSLHQNSIYSSSSLVFSSWIRGKDVCSSFHGIVCDSNGFVVEINLSSLNLSGVLPFDSICSSFKSLQKLSFGSNSLYGNVSHGLRNCSSLKHLDLGQNSFSGQLPDLSSLKELRFLNLNNSGFSGDFPWKSLLNLTHLVFLSLGDNSFNPTTSFPSQILELKNLYWLYLSNCSIHGEIPPGIGNLSLLQNLELSQNQLTGGIPSEIVNLKKLWQLELHENLLTGKLPLGFGNLTGLRKFDASINNLEGDLMELRFLTNLESLQLFQNRFSGTIPEEFGDFKELVGLSLYQNKLTGSLPQRIGSWAAFIFIDVSENFLTGPIPPDMCKQGTMTDLLMLQNSFIGGIPESYTKCKSLNRFRVNNNSLSGVVPYGIWSLPNLTIIDLSMNQFEGPVTSDIGKAKALAQLFLSNNQFSGNLPAELGEVSSLISIQLDSNQFVGPIPESLGKLKDLSSLSLNDNKFSDNIPSSLGSCTSLSTINLATNSFSGRIPENLGYLPILNSLNLSNNELSGEIPMSFSQLKLSSFDLSNNRLIGEVPESLAIEAFDESFMGNPGLCSESLRYLSSCSSTSRSSSHLRTLLSCTIAGILVLLVSSSCLLFIKWKRNDAKHLLKSRSWDMKPFHIVCFTEKEIIDSINSGNLIGKGGSGNVYKVVLSNGKELAVKHIWQSSSRDQTNYQTSATMLTKRMTRSSEYDAEVATLSSVRHVNVVKLYCSISSEDSNLLVYEYLPNGSLWDQLHTGRKIEMGWQIRYEVAIGAARGLEYLHHGCDRPVIHRDVKSSNILLDSDWKPRIADFGLAKILQDGCGSGDSSHVIAGTLGYLAPEYAYTCKINEKSDVYSFGVVLMELVTGKKPNEPEFGENKDIVQWAHSKMRDLKGNLKDMVDSSISEAQGEDAIKVLRIALRCTAKIPSTRPSMRMVVHMLEEAEPYNLIDIVVKKECEK 990
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 18453850 18457538 - Tan0002316.1 Tan02g1083 743709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1083 990 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 491 612 - -
Tan02g1083 990 SUPERFAMILY L domain-like 199 441 - -
Tan02g1083 990 Gene3D Ribonuclease Inhibitor 374 611 IPR032675 -
Tan02g1083 990 SUPERFAMILY Protein kinase-like (PK-like) 663 972 IPR011009 -
Tan02g1083 990 ProSitePatterns Serine/Threonine protein kinases active-site signature. 820 832 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g1083 990 Pfam Leucine rich repeat N-terminal domain 39 83 IPR013210 -
Tan02g1083 990 Gene3D Phosphorylase Kinase; domain 1 668 775 - -
Tan02g1083 990 Gene3D Transferase(Phosphotransferase) domain 1 776 984 - -
Tan02g1083 990 FunFam Leucine-rich repeat receptor-like protein kinase 776 986 - -
Tan02g1083 990 SMART serkin_6 683 978 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1083 990 ProSiteProfiles Leucine-rich repeat profile. 137 159 IPR001611 GO:0005515(InterPro)
Tan02g1083 990 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 27 974 IPR050647 -
Tan02g1083 990 SUPERFAMILY L domain-like 52 212 - -
Tan02g1083 990 ProSiteProfiles Protein kinase domain profile. 683 978 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1083 990 Gene3D Ribonuclease Inhibitor 39 199 IPR032675 -
Tan02g1083 990 Gene3D Ribonuclease Inhibitor 200 301 IPR032675 -
Tan02g1083 990 SUPERFAMILY L domain-like 384 588 - -
Tan02g1083 990 CDD STKc_IRAK 689 973 - -
Tan02g1083 990 ProSitePatterns Protein kinases ATP-binding region signature. 689 711 IPR017441 GO:0005524(InterPro)
Tan02g1083 990 FunFam Receptor-like protein kinase 7 128 378 - -
Tan02g1083 990 Gene3D Ribonuclease Inhibitor 302 373 IPR032675 -
Tan02g1083 990 Pfam Protein kinase domain 686 969 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1083 990 SMART LRR_typ_2 544 567 IPR003591 -
Tan02g1083 990 SMART LRR_typ_2 304 327 IPR003591 -
Tan02g1083 990 SMART LRR_typ_2 233 257 IPR003591 -
Tan02g1083 990 SMART LRR_typ_2 496 520 IPR003591 -
Tan02g1083 990 SMART LRR_typ_2 183 209 IPR003591 -
Tan02g1083 990 FunFam Inactive leucine-rich repeat receptor-like protein kinase 394 490 - -
Tan02g1083 990 FunFam Receptor-like protein kinase HAIKU2 666 775 - -
Tan02g1083 990 Pfam Leucine Rich Repeat 211 233 IPR001611 GO:0005515(InterPro)
Tan02g1083 990 Pfam Leucine Rich Repeat 137 154 IPR001611 GO:0005515(InterPro)
Tan02g1083 990 Pfam Leucine Rich Repeat 306 327 IPR001611 GO:0005515(InterPro)
Tan02g1083 990 Pfam Leucine Rich Repeat 236 257 IPR001611 GO:0005515(InterPro)
Tan02g1083 990 Pfam Leucine Rich Repeat 547 568 IPR001611 GO:0005515(InterPro)
Tan02g1083 990 Pfam Leucine Rich Repeat 499 520 IPR001611 GO:0005515(InterPro)
Tan02g1083 990 Pfam Leucine Rich Repeat 569 588 IPR001611 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g3892 Tan-Chr1:103895862 Tan02g1083 Tan-Chr2:18453850 2.50E-162 dispersed
Tan02g1083 Tan-Chr2:18453850 Tan05g2466 Tan-Chr5:75814122 1.40E-83 dispersed
Tan10g1457 Tan-Chr10:20006186 Tan02g1083 Tan-Chr2:18453850 3.80E-40 dispersed
Tan02g1083 Tan-Chr2:18453850 Tan01g3893 Tan-Chr1:103922963 2.60E-90 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67207 PF00069 Pkinase 4.40E-44 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1083 - - - 0.0