Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1099 ATGTGGGAACCGGTTAGTTGCTGCCAGAGCTCCCAGTCTCAGATTTATAGTGTAGTTAAACAAAAGAATCCTTTCAGGGCGTACTCTCATACTGTTCATCAACTTTGTGGACCTTCCTTCAACTCACATCATTCACACTCGAAGAAAGTGGCTGTTCCATCATGCACCATAAATTTCTGGAGGAATTATTATTCTTTCGTTCCTGTACTTTCCCACAACAGTGCTACTACGTTAACGTTCAAAGTAGTTGGACGGAATGGATACAATAGGTCTAATCATAGGCCTAAACCAAGGGAAAGAATAAGAATACGTGCAGCTCTTGATGTTGCAGCTGCTGTTGACGTCATCAATGATTTAGGATTGGATACATTGACATTCCTTGCTGTCACTGTCATAGTTGTTCCTCTATTTAGGAGAATTAAAGCTAGCCCTATACTCGGTTTCTTCTTTGCTGGGATTGTACTTAATCAATTTGGTGTGATTAGAAATCTTACTGATGTTAAAGTTTTGTCCGAATGGGGAATACTTTTCCTGCTATTTGAGATGGGTTTGGAGCTTTCATTTGCACGTCTAAAGGCTCTTGCAAGGTTTGCCTTTGGCATGGGTTTGACACAGGTTATATTATCTACTATCGCTTTCACAGCATTTGAACTTCCCACTAATGGGGCTATTGGAACAAGGATTTTGGAGTTCCTTTTTCACGCCAGATCTGACTTGGTTAACATCAGAAGTGTTGATGAAGCTATTGTGATTGGTGCTGCCCTTTCTCTATCTTCTTCAGCTTTTGTTTTACAGCTTCTTGCAGAGAAAGGAGAGCTTGCGACAAGATTTGGCTCAGCAACTCTAGGGATACTTCTCCTTCAGGATATTGCCGTTGTCCCTCTCCTGGTCGTACTTCCCGTTCTTGAGAGCCAGAATTTGGGCACGGAAAGTATCTGGCCAATGCTTGCACAAGAAAGTTTGAAGGCTTTAGGTGGATTGGGTCTGCTGTCCCTTGGAGGAAAGTTGATTCTTAGGCGAGTTTTTGAGGTTGTTGCGGAAGCAAGAAGCTCAGAGGCTTTTGTGGCCCTTTGCCTGTTGACAGTTGCTGGCACTTCACTAATCACTCAGAAATTGGGCTTCAGTGATACGCTGGGAGCATTTTTGGCTGGGGCAATATTAGCAGAAACTAATTTCCGGACACAGATTGAAGCAGATATTAGGCCATTTAGGGGCTTGCTCCTTGGGTTATTCTTTGTTACCACAGGGACCTCCATTGATATGCAGCTCCTTTTCCGTGAATGGCCAAATGTACTCGCACTTTTGGCGGGTTTAATAGCAATCAAGACCCTTATAATAACAGCAATAGGTCCCCGTGTGGGTCTCACTACTCAAGAAAGTGTAAGAATAGGATTTCTTCTATCTCAAGGAGGCGAGTTCGGATTTGTAGTGTTTTCTCTAGCTAACAGGCTTGGAGTGCTACCACTTGAGTTAAACAAGCTACTCATCATTATTGTTGTCTTGTCAATGGCACTAACCCCCTTGCTTAATGAAGCTGGACGAAAGGCATCTGACTTCATCAGCGATAAGTACAAGACAGAGGATAAAGCTGCAGACACGGTGAATTTTGACGCTACTGAACCTGTTGTCATTGTTGGATTTGGACAAATGGGTCAGGTCTTGGCGAATTTCTTGTCTACACCTTTGGTATCTGGGGTAGATGGCAATACTCCTGGATGGCCATATGTAGCATTTGACATTGATCTTTCCGTAGTGAAGAGGTCAAGAAAACTTGGTTTTCCTGTTCTCTATGGAGATGGATCACGACCAGCAGTTCTACAATCTGCTGGAATCTCTTCTCCAAAAGCTGTCATGGTTATGTTCACAGAGAAGAAGGCAACAATTGAGACTGTTCAAAAGCTCCGGCTTGCTTTCCCAGCGATCCCGATTTATGCCCGAGCTAAGGACGTGGTGCATCTATTAGATTTAAAGAATGCAGGTGCAACGGATGCTATTCTGGAAGATGCTGAGACTAGTTTACAACTTGGGTCAAAGCTTTTGAAAGGGCTGGGCGTCATGTCTGACCAAGTGTCTTTCCTCAGTCAGATGGTTCGCAACTCTATGGAAATACAAGCTCAAGATGCACTCGACAAATCCAATGAGCAAGAGTTAGAGATTATGAAACCAATGCAGATACGTGTCAAGGACTCGATCGAGTCCCCTGAGGACGAACTGTCAAGGCTGAACCGGGAAGATAATCCTCAGATCTTAAATGGCAAAGAAATGGATGAAAGGAAGCAAGATACTGTTTTCCAGAAGCCTGAAGATTTAGATGGAAATGGAGTCCTATACTGTGAACTTGATACAGAGGACAACTTTTTAGAGCAGAATATGGTAGAGCCCCCAACCCCTTACATGACAGCCACTGATGGTTTAGAAAAGTGA 2424 43.48 MWEPVSCCQSSQSQIYSVVKQKNPFRAYSHTVHQLCGPSFNSHHSHSKKVAVPSCTINFWRNYYSFVPVLSHNSATTLTFKVVGRNGYNRSNHRPKPRERIRIRAALDVAAAVDVINDLGLDTLTFLAVTVIVVPLFRRIKASPILGFFFAGIVLNQFGVIRNLTDVKVLSEWGILFLLFEMGLELSFARLKALARFAFGMGLTQVILSTIAFTAFELPTNGAIGTRILEFLFHARSDLVNIRSVDEAIVIGAALSLSSSAFVLQLLAEKGELATRFGSATLGILLLQDIAVVPLLVVLPVLESQNLGTESIWPMLAQESLKALGGLGLLSLGGKLILRRVFEVVAEARSSEAFVALCLLTVAGTSLITQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFVTTGTSIDMQLLFREWPNVLALLAGLIAIKTLIITAIGPRVGLTTQESVRIGFLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIIVVLSMALTPLLNEAGRKASDFISDKYKTEDKAADTVNFDATEPVVIVGFGQMGQVLANFLSTPLVSGVDGNTPGWPYVAFDIDLSVVKRSRKLGFPVLYGDGSRPAVLQSAGISSPKAVMVMFTEKKATIETVQKLRLAFPAIPIYARAKDVVHLLDLKNAGATDAILEDAETSLQLGSKLLKGLGVMSDQVSFLSQMVRNSMEIQAQDALDKSNEQELEIMKPMQIRVKDSIESPEDELSRLNREDNPQILNGKEMDERKQDTVFQKPEDLDGNGVLYCELDTEDNFLEQNMVEPPTPYMTATDGLEK 807
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 19948953 19966196 - Tan0001158.1 Tan02g1099 743725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1099 807 Gene3D - 541 711 - -
Tan02g1099 807 ProSiteProfiles RCK N-terminal domain profile. 541 673 IPR003148 GO:0006813(InterPro)
Tan02g1099 807 FunFam K(+) efflux antiporter 3, chloroplastic 118 517 - -
Tan02g1099 807 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 541 679 IPR036291 -
Tan02g1099 807 MobiDBLite consensus disorder prediction 732 766 - -
Tan02g1099 807 FunFam Glutathione-regulated potassium-efflux system protein KefB 539 711 - -
Tan02g1099 807 Pfam TrkA-N domain 542 665 IPR003148 GO:0006813(InterPro)
Tan02g1099 807 Coils Coil 698 718 - -
Tan02g1099 807 Gene3D - 118 517 IPR038770 -
Tan02g1099 807 MobiDBLite consensus disorder prediction 732 773 - -
Tan02g1099 807 Pfam Sodium/hydrogen exchanger family 129 510 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Tan02g1099 807 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 20 725 - GO:0009507(PANTHER)|GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1099 Tan-Chr2:19948953 Tan10g0265 Tan-Chr10:2327004 2.20E-92 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1099 K03455 - csv:101209266 1368.6