Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1130 | ATGTTGCAATTTTCGATTCGGCGAGTGAGGAAATTGAATGTTCTGAGGCCTCAGATCTTTGCTTTTGGAAATTCTCGATTCTCCACCTCTGCTGAACCGTCTTCCAAGCCTAATCCTCCGAGGGTTCCGAATCTCATAGGAGGGACTTTTGTTGATTCTCAATCCTCAGCATTCATAGATGTCATAAACCCAGCAACACAAGAAGTTGTTTCTCAAGTTCCATTGACCACGAATGAAGAATTTAAAGCTGCAGTATCTGCAGCAAAGCAGGCTTTTCCTGCATGGCGTAATACTCCAGTTACAACTCGTCAACGGATTATGTTTAAGCTTCAAGAACTTATCCGGCGAGATATTGATAAACTTGCTCTAAATATTACCACAGAACAAGGAAAAACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGAGGTTGTGGAACATGCATGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCTAATGTGTCACATGGAATTGATTCGTACAGCATCAGAGAGCCTCTTGGTGTTTGTGCTGGGATTTGTCCATTCAATTTTCCAGCCATGATCCCCCTATGGATGTTCCCAATTGCTGTTACATGTGGGAATACCTTTGTTCTGAAACCTTCAGAAAAAGATCCAGGGGCTTCTATAATCCTCGCAGAGTTAGCAATGGAGGCTGGATTGCCTAATGGTGTCCTAAATGTGGTTCATGGTACCAATGATGTTGTTAATTCCATTTGTGATGATGAAGATATAAAAGCAATATCATTTGTCGGTTCAAACATTGCGGGCATGCATATATATTCAAGGGGATCAGCTAAAGGAAAACGTGTTCAGTCCAATATGGGGGCAAAAAATCATGCAATTGTCTTGCCCGATGCCAGCGTAGATGCTACTTTGAATGCTTTGGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCACTCAGTACAGTTGTCTTTGTTGGAGACTCCAAGTTGTGGGAAGATAAACTTGTAGAACGTGCCAAATCTCTGAAGGTAAATTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGAGAGGATTCACAGATTAGTTCAATCTGGCATTGATAGTGGAGCCAGGCTATTGCTAGATGGGAGAAATATAGTGGTTCCTGGATACGAGCATGGAAATTTTATTGGCCCAACTATCTTAACAGACGTGACGCCGGACATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGGAAGTTTAGAGGAGGCCATTAGCATCGTTAATGGAAATAGGTATGGCAATGGAGCTTCCATATTCACCACATCTGGGATAGCGGCGAGGAAGTTTCAAACAGATATTGAAGCTGGACAGGTTGGGATCAACGTCCCGATTCCAGTTCCCTTACCGTTCTTCTCCTTCACCGGCTCCAAGGCATCTTTTGCTGGGGACCTCAATTTTTATGGCAAGGCTGGAGTTAATTTCTTCACTCAGATCAAAACAGTGACACAACAATGGAAAGACTCACCTGGAGGAACCGCAGTCAACCTTGCAATGCCAACCTCTCTCAAATCATAG | 1614 | 43.93 | MLQFSIRRVRKLNVLRPQIFAFGNSRFSTSAEPSSKPNPPRVPNLIGGTFVDSQSSAFIDVINPATQEVVSQVPLTTNEEFKAAVSAAKQAFPAWRNTPVTTRQRIMFKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDSYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHGTNDVVNSICDDEDIKAISFVGSNIAGMHIYSRGSAKGKRVQSNMGAKNHAIVLPDASVDATLNALVAAGFGAAGQRCMALSTVVFVGDSKLWEDKLVERAKSLKVNSGTEPDADLGPVISKQAKERIHRLVQSGIDSGARLLLDGRNIVVPGYEHGNFIGPTILTDVTPDMECYKEEIFGPVLLCMQAGSLEEAISIVNGNRYGNGASIFTTSGIAARKFQTDIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSPGGTAVNLAMPTSLKS | 537 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 22734620 | 22743143 | + | Tan0013018.1 | Tan02g1130 | 743756 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1130 | 537 | PANTHER | MALONATE-SEMIALDEHYDE DEHYDROGENASE | 9 | 534 | IPR010061 | GO:0004491(InterPro)|GO:0004491(PANTHER)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER) | |
Tan02g1130 | 537 | FunFam | Methylmalonate-semialdehyde dehydrogenase (Acylating) | 287 | 487 | - | - | |
Tan02g1130 | 537 | Pfam | Aldehyde dehydrogenase family | 50 | 514 | IPR015590 | GO:0016491(InterPro) | |
Tan02g1130 | 537 | CDD | ALDH_F6_MMSDH | 42 | 518 | IPR010061 | GO:0004491(InterPro) | |
Tan02g1130 | 537 | NCBIfam | CoA-acylating methylmalonate-semialdehyde dehydrogenase | 44 | 518 | IPR010061 | GO:0004491(InterPro) | |
Tan02g1130 | 537 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 2 | 287 | 487 | IPR016163 | GO:0016620(InterPro) | |
Tan02g1130 | 537 | FunFam | Methylmalonate-semialdehyde dehydrogenase [acylating] | 46 | 293 | - | - | |
Tan02g1130 | 537 | SUPERFAMILY | ALDH-like | 38 | 519 | IPR016161 | GO:0016491(InterPro) | |
Tan02g1130 | 537 | ProSitePatterns | Aldehyde dehydrogenases cysteine active site. | 312 | 323 | IPR016160 | GO:0016491(InterPro) | |
Tan02g1130 | 537 | Gene3D | Aldehyde Dehydrogenase; Chain A, domain 1 | 61 | 495 | IPR016162 | GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1130 | Tan-Chr2:22734620 | Tan03g1777 | Tan-Chr3:73510572 | 8.80E-194 | dispersed | |
Tan02g1130 | Tan-Chr2:22734620 | Tan02g1131 | Tan-Chr2:22734620 | 2.00E-246 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1130 | K00140 | - | csv:101204924 | 1008.05 |