Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1131 ATGTTTAAGCTTCAAGAACTTATCCGGCGAGATATTGATAAACTTGCTCTAAATATTACCACAGAACAAGGAAAAACATTAAAGGATGCACATGGAGATGTATTCCGTGGGCTAGAGGTTGTGGAACATGCATGTGGAATGGCATCTCTGCAAATGGGGGAGTATGTCTCTAATGTGTCACATGGAATTGATTCGTACAGCATCAGAGAGCCTCTTGGTGTTTGTGCTGGGATTTGTCCATTCAATTTTCCAGCCATGATCCCCCTATGGATGTTCCCAATTGCTGTTACATGTGGGAATACCTTTGTTCTGAAACCTTCAGAAAAAGATCCAGGGGCTTCTATAATCCTCGCAGAGTTAGCAATGGAGGCTGGATTGCCTAATGGTGTCCTAAATGTGGTTCATGGTACCAATGATGTTGTTAATTCCATTTGTGATGATGAAGATATAAAAGCAATATCATTTGTCGGTTCAAACATTGCGGGCATGCATATATATTCAAGGGGATCAGCTAAAGGAAAACGTGTTCAGTCCAATATGGGGGCAAAAAATCATGCAATTGTCTTGCCCGATGCCAGCGTAGATGCTACTTTGAATGCTTTGGTTGCTGCTGGTTTTGGTGCTGCTGGACAAAGGTGCATGGCACTCAGTACAGTTGTCTTTGTTGGAGACTCCAAGTTGTGGGAAGATAAACTTGTAGAACGTGCCAAATCTCTGAAGGTAAATTCTGGAACAGAACCTGATGCAGATCTTGGTCCAGTAATTAGCAAGCAGGCAAAGGAGAGGATTCACAGATTAGTTCAATCTGGCATTGATAGTGGAGCCAGGCTATTGCTAGATGGGAGAAATATAGTGGTTCCTGGATACGAGCATGGAAATTTTATTGGCCCAACTATCTTAACAGACGTGACGCCGGACATGGAGTGCTACAAGGAAGAAATATTTGGCCCAGTTCTGCTTTGCATGCAGGCTGGAAGTTTAGAGGAGGCCATTAGCATCGTTAATGGAAATAGGTATGGCAATGGAGCTTCCATATTCACCACATCTGGGATAGCGGCGAGGAAGTTTCAAACAGATATTGAAGCTGGACAGGTTGGGATCAACGTCCCGATTCCAGTTCCCTTACCGTTCTTCTCCTTCACCGGCTCCAAGGCATCTTTTGCTGGGGACCTCAATTTTTATGGCAAGGCTGGAGTTAATTTCTTCACTCAGATCAAAACAGTGACACAACAATGGAAAGACTCACCTGGAGGAACCGCAGTCAACCTTGCAATGCCAACCTCTCTCAAATCATAG 1296 43.98 MFKLQELIRRDIDKLALNITTEQGKTLKDAHGDVFRGLEVVEHACGMASLQMGEYVSNVSHGIDSYSIREPLGVCAGICPFNFPAMIPLWMFPIAVTCGNTFVLKPSEKDPGASIILAELAMEAGLPNGVLNVVHGTNDVVNSICDDEDIKAISFVGSNIAGMHIYSRGSAKGKRVQSNMGAKNHAIVLPDASVDATLNALVAAGFGAAGQRCMALSTVVFVGDSKLWEDKLVERAKSLKVNSGTEPDADLGPVISKQAKERIHRLVQSGIDSGARLLLDGRNIVVPGYEHGNFIGPTILTDVTPDMECYKEEIFGPVLLCMQAGSLEEAISIVNGNRYGNGASIFTTSGIAARKFQTDIEAGQVGINVPIPVPLPFFSFTGSKASFAGDLNFYGKAGVNFFTQIKTVTQQWKDSPGGTAVNLAMPTSLKS 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22734620 22743143 + Tan0013018.2 Tan02g1131 743757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1131 431 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 1 428 IPR010061 GO:0004491(InterPro)|GO:0004491(PANTHER)|GO:0005739(PANTHER)|GO:0006210(PANTHER)|GO:0006574(PANTHER)|GO:0018478(PANTHER)
Tan02g1131 431 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 181 381 IPR016163 GO:0016620(InterPro)
Tan02g1131 431 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 1 389 IPR016162 GO:0016491(InterPro)
Tan02g1131 431 FunFam Methylmalonate-semialdehyde dehydrogenase [acylating] 1 187 - -
Tan02g1131 431 SUPERFAMILY ALDH-like 2 413 IPR016161 GO:0016491(InterPro)
Tan02g1131 431 NCBIfam CoA-acylating methylmalonate-semialdehyde dehydrogenase 1 412 IPR010061 GO:0004491(InterPro)
Tan02g1131 431 CDD ALDH_F6_MMSDH 1 412 IPR010061 GO:0004491(InterPro)
Tan02g1131 431 Pfam Aldehyde dehydrogenase family 1 408 IPR015590 GO:0016491(InterPro)
Tan02g1131 431 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 181 381 - -
Tan02g1131 431 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 206 217 IPR016160 GO:0016491(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1131 Tan-Chr2:22734620 Tan03g1777 Tan-Chr3:73510572 9.30E-162 dispersed
Tan02g1130 Tan-Chr2:22734620 Tan02g1131 Tan-Chr2:22734620 2.00E-246 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1131 K00140 - csv:101204924 824.313