Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1179 | ATGCCTTCAAAGGGAAAGAAGAACTCAAAGACACTTTCTAGATTGTCAAACTCGAACCACTCTCAATCTCCATTGCCACGATTGGCAATACCTCCTGCCTCTGAAGTTTGTGAAGATGATTTTCTTTCCTCTATTGAAGAAGCTTCAAGTAAATACCCTTCTTTGATTGGTAAATCTGCTTTCATTGGTACCGTTGCTAATGCTCCAGTTCAATCTACTGGCTGTAAAGTTTGGGTTTCTGAATCTTCTATGGTTGCTTCTAGCTTCACCCAAGGGGCTATCGTCTCGGTAGCACTTAGATTTGAGGGAGGTAACAATTTAAAAGGTTTTTCTCTTTCCTCATTAGCAGATGAATGTGGTAGGCACTTCGGGGTTGATTATGGAGATTCATTAACCAATGAAGCGGGAAATTACTTTGCTCTTGCGAGAATTTTCTCGTCTAGTAAGGAGTTAAATGACGGAGTGCAATTATCAACAAACCTCTCGTACACCTTGGGTTGGCCTGCAATAGGCCGTGTTGTGTTTATCTCCCCTTTAAAAAATAACCTATGCAATGACCCACTAAGTGAAAATCAGAAATTGAAGAGCACAGAAGTTGAATCTCTGAAAATATACAACTGTAAGGAACTGTTCCTGGAGCTAGCTTCTTCAACCAATATATCAACAAAAGACAACTTATTCTCTTCCTCAACTATTGGTTCTAGAAAGGTTCATGGTTATGGTGAAAATGGTAATTTAGCATCCCCGAGCTCCATGCTGTCTACATCTCCTAAATGTGATGATGCAGTAGCAGTATCGAATATACTTGTAGAGAGTCCATGTGCTCATTCATTTATTAAGGAGGCCTTAGGAGATGACAGTGTTAAAAAAACTTTACAGACAATTGCTTCCAATGAGTTATATAAACGTTGTTTGCTGCGTGGTAATCTTGTAACTATCCCAGTGCTTTCAGATCTTTGTACATTCCATGTGAGGGGTGGTAAAGGACCGTCGGCATATGACAACTCTTATAATTCTATGGACAATGGAAACAGCCATCATGTTCAAGATTTTGTATCAAATGAATATGTGGATCATGCTTTCAACATAGACCAGCTGACAAAAGTATTTATAAATGTTCAATCAACCAGAGTCTCAGAGACACTGCAAGAAAGAGTTCCATCAAATGTGAAACCTCAAAATCTAAATATTAGAGCTAAAGTAAAGAGTGAAGTTTGGAAATTAGGCGGCCTTTCTAAAGAATATTCAGTTTTGAAGGATATTATAATTGCCTCATCTTTAAGTAGCACCCTGTCAAGCCTTGGTTTACGAGCCACAAAGGGAGTACTTCTTCATGGTCCTCCTGGTACTGGAAAAACTTCCTTGGCTCAATTATGTGCTCATGACGCTGGTGTCAACTTATTCTATTTGAATGGACCTGAAATCATAAGTCAATATCATGGGGAAAGTGAACAGGCCTTGCATGAAGTTTTCGAGATGGCAAGCCAAAATGTACCTGCTGTGATATTAATTGATGAGTTGGATGCTATTGGACCTGCAAGAAAAGAAGGAGGTGAAGAGCTGTCTCAAAGAATTGTTGCTACATTGCTTAATCTGATGGATGGGATCAACCGAAGTGGTGGGCCACTTGTAATTGCTTCTACCAACAGGCCTGATAGCATTGAGCCTGCACTAAGGCGGCCTGGGAGACTTGACCGGGAAATTGAAATAGGTGTGCCATCTCCCAATCAACGATTGGATATTCTACATACAATACTAAGTGAAATGGAGCATTCTCTTTCAGACCTGCAAGTTCAGCATCTAGCTATGGTTACACATGGTTTTGTGGGTGCTGATTTGGCTGCCCTTTGCAATGAGGCTGCCTTAGTTTGTATAAGGCGGTATCACGAGTCTAAAGTTTCTACTGATTGCCGTAGTTCTGGTAGATCTATTATAGCAGAGGAACAACATAAGTTTACCAAGGTGGATCACGAAGCCAACGTTGATGATATGATTTTGGAACCTGTTCTCTCAAAAGATGTGAGAAGTAGGTCAGGAGTTTGCTCAAACTTTGCGTCTTCATCATTCTCTAAATGTAGTTCTACATCCGAGTCTCTAACATGTATGTCCTCGAGTGAAGTGGTAGCTGATAGTGAGGATATTTTTAACTTGTCTGAAATCAAGTGTGGATTGAAGGTTGTTTTTGAAGATTTTGAGATGGCCAGAATGAAAGTGAGGCCTAGTGCCATGCGAGAGGTCATACTTGAGGTTCCAAAGGTAAAATGGGAAGATATTGGTGGACAAAAGGAGGTCAAGGTTCAATTAATGGAAGCAGTGGAATGGCCTCAAAAACATCAGGAGGCATTCAAGAGAATAGGGACTCGACCTCCAACAGGAGTGTTAATGTTTGGTCCGCCTGGATGTAGCAAAACTCTCATGGCACGTGCTGTAGCTTCTGAAGCAGGACTAAATTTTCTTGCAGTAAAGGGCCCAGAACTTTTCAGTAAATGGGTTGGTGAATCTGAGAAGGCAGTTAGATCTCTATTTGCTAAGGCAAGAGCTAATGCTCCATCAATCATATTTTTTGATGAAATTGATGGTCTTGCTGTCACTCGTGGGAAGGAAAGTGATGGGATTTCTGTCTCTGATAGAGTTATGAGTCAACTTCTTGTTGAATTGGATGGTTTACATCAGAGAGTTGGTGTTACTGTCATTGCAGCTACCAATCGGCCGGATAAAATTGATCCAGCCCTTCTAAGGCCAGGTATTACCCCATACAGAAACTTCTATACACTCATACACCACAAATCTGCTACAACATCTGCACTGAACAAATGCATTCTGCCCAGTTTTTTCTTTTCTTTTTGTTTTTTGTTGCTATATGTTGGGCCTCCAAGTGAATCTGAACGAGAAGAGATATTTAGTATCCATTTGTGCAAAATTCCTTGCAGCCCAAATGTCAGCACAAGGAAGTTGGCTTCTCTTGCTCAAGGCTGTACAGGGGCTGACATATCATTAATCTGCAGAGAAGCAGCTTTATTTGCCCTCGAGGAGAACCTTGAGGTTTCAAAAATAAATATGCAACATTTAGAAACTGCAGTTAGACACGTGAAGCCATCTGCAACTGAACCCTATCAAGAATTATCATCTAGGTTTCAAAGGTTTGTGTGTTCTAGCTCACAAGGAGCTAATGTAATCTCTTCCCCTTCTATTTTCACCCCACATAGATCTCTTCCCCTTCTATTTTCTACCCACTAG | 3237 | 40.75 | MPSKGKKNSKTLSRLSNSNHSQSPLPRLAIPPASEVCEDDFLSSIEEASSKYPSLIGKSAFIGTVANAPVQSTGCKVWVSESSMVASSFTQGAIVSVALRFEGGNNLKGFSLSSLADECGRHFGVDYGDSLTNEAGNYFALARIFSSSKELNDGVQLSTNLSYTLGWPAIGRVVFISPLKNNLCNDPLSENQKLKSTEVESLKIYNCKELFLELASSTNISTKDNLFSSSTIGSRKVHGYGENGNLASPSSMLSTSPKCDDAVAVSNILVESPCAHSFIKEALGDDSVKKTLQTIASNELYKRCLLRGNLVTIPVLSDLCTFHVRGGKGPSAYDNSYNSMDNGNSHHVQDFVSNEYVDHAFNIDQLTKVFINVQSTRVSETLQERVPSNVKPQNLNIRAKVKSEVWKLGGLSKEYSVLKDIIIASSLSSTLSSLGLRATKGVLLHGPPGTGKTSLAQLCAHDAGVNLFYLNGPEIISQYHGESEQALHEVFEMASQNVPAVILIDELDAIGPARKEGGEELSQRIVATLLNLMDGINRSGGPLVIASTNRPDSIEPALRRPGRLDREIEIGVPSPNQRLDILHTILSEMEHSLSDLQVQHLAMVTHGFVGADLAALCNEAALVCIRRYHESKVSTDCRSSGRSIIAEEQHKFTKVDHEANVDDMILEPVLSKDVRSRSGVCSNFASSSFSKCSSTSESLTCMSSSEVVADSEDIFNLSEIKCGLKVVFEDFEMARMKVRPSAMREVILEVPKVKWEDIGGQKEVKVQLMEAVEWPQKHQEAFKRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDGLAVTRGKESDGISVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDPALLRPGITPYRNFYTLIHHKSATTSALNKCILPSFFFSFCFLLLYVGPPSESEREEIFSIHLCKIPCSPNVSTRKLASLAQGCTGADISLICREAALFALEENLEVSKINMQHLETAVRHVKPSATEPYQELSSRFQRFVCSSSQGANVISSPSIFTPHRSLPLLFSTH | 1078 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 26367129 | 26389637 | - | Tan0013413.1 | Tan02g1179 | 743805 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1179 | 1078 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 408 | 627 | IPR027417 | - | |
Tan02g1179 | 1078 | Pfam | ATPase family associated with various cellular activities (AAA) | 793 | 915 | IPR003959 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
Tan02g1179 | 1078 | Pfam | ATPase family associated with various cellular activities (AAA) | 442 | 571 | IPR003959 | GO:0005524(InterPro)|GO:0016887(InterPro) | |
Tan02g1179 | 1078 | CDD | RecA-like_CDC48_r2-like | 764 | 915 | - | - | |
Tan02g1179 | 1078 | FunFam | Putative vesicular transport protein (CDC48) | 393 | 571 | - | - | |
Tan02g1179 | 1078 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Tan02g1179 | 1078 | Gene3D | - | 734 | 937 | IPR027417 | - | |
Tan02g1179 | 1078 | Gene3D | - | 388 | 571 | IPR027417 | - | |
Tan02g1179 | 1078 | FunFam | calmodulin-interacting protein 111 isoform X1 | 750 | 920 | - | - | |
Tan02g1179 | 1078 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 751 | 1040 | IPR027417 | - | |
Tan02g1179 | 1078 | Gene3D | - | 572 | 691 | - | - | |
Tan02g1179 | 1078 | PANTHER | AAA-FAMILY ATPASE | 67 | 1045 | IPR050168 | GO:0005737(PANTHER)|GO:0009507(PANTHER)|GO:0016887(PANTHER) | |
Tan02g1179 | 1078 | Pfam | AAA+ lid domain | 980 | 1024 | IPR041569 | - | |
Tan02g1179 | 1078 | Pfam | AAA+ lid domain | 595 | 634 | IPR041569 | - | |
Tan02g1179 | 1078 | Gene3D | - | 958 | 1041 | - | - | |
Tan02g1179 | 1078 | SMART | AAA_5 | 789 | 927 | IPR003593 | GO:0016887(InterPro) | |
Tan02g1179 | 1078 | SMART | AAA_5 | 438 | 574 | IPR003593 | GO:0016887(InterPro) | |
Tan02g1179 | 1078 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Tan02g1179 | 1078 | ProSitePatterns | AAA-protein family signature. | 895 | 913 | IPR003960 | GO:0005524(InterPro)|GO:0016887(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1179 | Tan-Chr2:26367129 | Tan09g0520 | Tan-Chr9:47555231 | 0.00E+00 | dispersed | |
Tan02g1178 | Tan-Chr2:26366948 | Tan02g1179 | Tan-Chr2:26367129 | 0.00E+00 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1179 | - | - | - | 0.0 |