Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1223 | ATGGCGGACCGTGGATCTTACGGCTTGGCTCCTCGTCTAGATATTGACCAGTTATTGATAGAAGCAAAACATCGTTGGTTACGTCCAGCTGAAATTTGTGAAATACTCCGTAACTACCCTAAGTTTCATATTGCTTCAGAGCCTCCAGAGAGACCATCAAGTGGGTCACTTTTTCTTTTTGATCGGAAGGTTCTGAGGTACTTTAGAAAGGATGGACATAAATGGAGGAAGAAGAAAGATGGCAAAACTGTAAAGGAAGCTCATGAGAAGCTGAAGGTTGGAAGCATTGATGTACTGCACTGCTATTATGCCCATGGAGAAGAAAATGAGAACTTTCAAAGGCGCAGTTATTGGATGCTTGAAGAGCATTTAATGCACATAGTTTTTGTCCACTACTTGGAAGTTAAGGGTAATAGAACCAATATTGGAGCTGTAGTTGAGACTGATGAGGTTTCATCAAGTTCACAGAAGAGCAGTCCTCAGAGTTCTAGCTATTCCAGCAGTCATAATCAAGCAGCTTCTGAAAATGCAGATTCCCCCAGCCCAACCAGCACTTTGACATCATTTTGTGAAGATGCTGATACTGAAGACACTTACCAAGCAACCTCAAGATTTCACTCATTTCCAACATCACCAAAAATGGGCAATGGTCTTCTGGTGAATAAAAAAGATGCTGGTCTATCCAATTTTTACTTTCCGCATTCCTCTTCCAATAATGTTGAAGCTTGGTCATCAGTTCCTTCCATGGAATATGTATCACAAGTTCAGAAAGATGGACTTGGAAGTAGTGATGGTGGTACTGGTGGGATTGGTTCTCAGAAGACACTCAGCTCTGCCTCATGGGAAGAGATCCTGCAACAATGTACAACTGGATTTCAAACTGTACCTTCTCAGGTTTTAAACCCTTCGATTGAACCTCTGTCTTCTGGAATTGTCCTTGGACAAGAGAATTCAACTCCTGGCAAGCTTTTAGCCGGTAATAGTGCTGTTAAAGAGGACTTTGGGAGCTCTCTGACAATGACATCAAACTGGCAGGTTCCTTTTGAAGACAATACTTTGTCCTTTTCAAAAGGGCACGTTGACCAGTTTCCAGATTTATATTCAGTTTATGACATAGATGGCAGGTTAACTGAGCAGAAATCGCATAATGCAACTTTTGGAAGTGGTCATGAGATGTTTTGTGCTCATCCTGGCATAGAGAATGAGGAGATTTTGTCCAACAACCTCGAATTACAGTTCAATGAAGGAGAATCATATTCTGCAATGAGGTTGAATTCTGAAAATGATATGTCTAAAGAAGGTGCCATCAACTATTCTTTGACTTTGAAACAATCATTAATAGATGGAGAGGAGAGTTTGAAGAAAGTCGACAGCTTCTCACGGTGGGTGTCTAGAGAGCTTGTGGAAGTTGATGATTTGCACATGCATCCATCATCTGGCTTGTCTTGGAGCACGGTAGAATGTGATGATATTGTGGATGATTCATCATTAAGCCCTTCTCTTTCTGAAGACCAGCTTTTCAGTATAACAGACTTTTCTCCAAAGTGGACACTTGCAGATTTAGAAACCGAGGTTGTGATTATAGGAAAGTTTCTGGGGAACAATCATGGCACAAAATGTTACTGGTCATGCATGTTTGGGGAAGTCGAGGTTCCTGCAGAGGTTTTGGCTGATGGGATCCTGTGCTGTCATGCACCGCCACATAGTGTTGGGCAAGTCCCTTTTTATGTTACATGTTCCAACAGATTAGCTTGCAGTGAGGTGCGTGAATTTGATTACTTGGCAGGCTCTGCTCAAGATGTAGATGTTACCGAAGTATATAATGCTGGTGCTACAGAAGAATTAGATTTGCATTTGCGGTTTGAGAGGTTACTGTCCCCTAGGTCTTCAGATCCTCCAAATAACCTCTCTGAAGGTGCCTTGGAGAAACGGAACTTAATCAGAAAGCTTATCTCAATAAAAGAAGAAGAAGATTGTTATGGAGAAGAGCCAAATTCTCAGAATGATCAAATTCAGCATCAAAGCAAGGATTCTCTTTTTGTAAAGCTGATGAAAGAAAAGCTGTACTCATGGCTTATTCGTAAAGTTATTGAAGATGGCAAAGGTCCTAATATATTGGATGATAAGGGACAGGGAGTAATTCATTTAGCAGCAGCCCTTGGTTATGATTGGGCAATCAGACCAATTGTAGCTGCAGGAGTGAGTATAAACTTTAGAGACGTTAATGGATGGACTGCTGTTCATTGGGCAGCATTATATGGCAGGGAGTTGACAGTTGGAACCCTTATAACTTTGGGTGCTGCTCCTGGATTGCCGTCAGATCCATCTCCAGAAATTCCTTTGGGCATAATGGCTGCAGACCTTGCTTCTATAAATGGACACAAAGGGATCTCTGGTTTTCTAGCAGAGTCATCATTGACCAGCTTTGTCTCATCTGTATCGATGGCAGATACCAAAGAAGATGGTGTGCTAGACGCTTCAAAAAGGAAAGCTGTGTATACTGTTTCAGAACGAAAGGCAACCCCGATAAATGATGGTTTTATGCCTGGTGATTTGTCTTTGAAGGATTCATTGACTGCTGTCTGCAATGCCACTCAAGCTGCTGACCGTATACATCTGATGTTTAGAGTGAAGTCATTTCAGAGGAATCAATTATCAGAGTGTGGTCCTGATGAATTTGGATCCTCAGATGATAGTGCTATTTCATTTGTCACTGCCAGGGCACGTAAGTCTGGACTAAGTAACAGCCCGGCCCATGCTGCTGCAGTTCACATACAGAAAAAGTTCCGTGGTTGGAGAATGAGAAAAGAATTCTTGCTAATACGTCAAAGAATAGTGAAAATTCAGGCCCATGTGAGGGGGCACCAGGTGAGGAAGCAATATAAAAAGATTGTCTGGTCAGTAGGAATATTAGACAAGATTATTTTGAGATGGAGACGGAAGGGGAGTGGTTTGCGAGGCTTCCGACCCGATACAGTTGCTAAGGATCCACCCTCTGTGATGGAACCGCCTAAAGAGGATGATTATGATTTTCTGAAGGAAGGTAGGAGGCAGACTGAGGAAAGATTTCAAAAAGCACTCACCAGAGTTAAGTCCATGGCTCAGTATCCTGAGGGACGAGACCAATATCGTAGGCTACTTACTGTGGTTCAAAAGTGCCGAGAAACCAAGGTGAGTAATATGGCTATTACTAGTTCTTCAGAAGAGATAATAGAAGCCGATGACATGATTGATATCGACACACTGCTGGACGATGACGCTTTGATGTCTATGACATTTGATTGA | 3285 | 42.19 | MADRGSYGLAPRLDIDQLLIEAKHRWLRPAEICEILRNYPKFHIASEPPERPSSGSLFLFDRKVLRYFRKDGHKWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWMLEEHLMHIVFVHYLEVKGNRTNIGAVVETDEVSSSSQKSSPQSSSYSSSHNQAASENADSPSPTSTLTSFCEDADTEDTYQATSRFHSFPTSPKMGNGLLVNKKDAGLSNFYFPHSSSNNVEAWSSVPSMEYVSQVQKDGLGSSDGGTGGIGSQKTLSSASWEEILQQCTTGFQTVPSQVLNPSIEPLSSGIVLGQENSTPGKLLAGNSAVKEDFGSSLTMTSNWQVPFEDNTLSFSKGHVDQFPDLYSVYDIDGRLTEQKSHNATFGSGHEMFCAHPGIENEEILSNNLELQFNEGESYSAMRLNSENDMSKEGAINYSLTLKQSLIDGEESLKKVDSFSRWVSRELVEVDDLHMHPSSGLSWSTVECDDIVDDSSLSPSLSEDQLFSITDFSPKWTLADLETEVVIIGKFLGNNHGTKCYWSCMFGEVEVPAEVLADGILCCHAPPHSVGQVPFYVTCSNRLACSEVREFDYLAGSAQDVDVTEVYNAGATEELDLHLRFERLLSPRSSDPPNNLSEGALEKRNLIRKLISIKEEEDCYGEEPNSQNDQIQHQSKDSLFVKLMKEKLYSWLIRKVIEDGKGPNILDDKGQGVIHLAAALGYDWAIRPIVAAGVSINFRDVNGWTAVHWAALYGRELTVGTLITLGAAPGLPSDPSPEIPLGIMAADLASINGHKGISGFLAESSLTSFVSSVSMADTKEDGVLDASKRKAVYTVSERKATPINDGFMPGDLSLKDSLTAVCNATQAADRIHLMFRVKSFQRNQLSECGPDEFGSSDDSAISFVTARARKSGLSNSPAHAAAVHIQKKFRGWRMRKEFLLIRQRIVKIQAHVRGHQVRKQYKKIVWSVGILDKIILRWRRKGSGLRGFRPDTVAKDPPSVMEPPKEDDYDFLKEGRRQTEERFQKALTRVKSMAQYPEGRDQYRRLLTVVQKCRETKVSNMAITSSSEEIIEADDMIDIDTLLDDDALMSMTFD | 1094 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 30872441 | 30897221 | - | Tan0014675.1 | Tan02g1223 | 743849 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1223 | 1094 | CDD | IPT | 508 | 594 | - | - | |
Tan02g1223 | 1094 | SMART | iq_5 | 940 | 962 | IPR000048 | GO:0005515(InterPro) | |
Tan02g1223 | 1094 | SMART | iq_5 | 917 | 939 | IPR000048 | GO:0005515(InterPro) | |
Tan02g1223 | 1094 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 918 | 968 | IPR027417 | - | |
Tan02g1223 | 1094 | ProSiteProfiles | IQ motif profile. | 941 | 965 | - | - | |
Tan02g1223 | 1094 | Pfam | IPT/TIG domain | 508 | 581 | IPR002909 | - | |
Tan02g1223 | 1094 | Pfam | CG-1 domain | 21 | 134 | IPR005559 | GO:0003677(InterPro) | |
Tan02g1223 | 1094 | Pfam | IQ calmodulin-binding motif | 943 | 962 | IPR000048 | GO:0005515(InterPro) | |
Tan02g1223 | 1094 | Pfam | IQ calmodulin-binding motif | 919 | 938 | IPR000048 | GO:0005515(InterPro) | |
Tan02g1223 | 1094 | Gene3D | Immunoglobulins | 502 | 597 | IPR013783 | - | |
Tan02g1223 | 1094 | ProSiteProfiles | IQ motif profile. | 918 | 947 | - | - | |
Tan02g1223 | 1094 | PANTHER | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA | 14 | 1057 | - | GO:0003690(PANTHER)|GO:0003712(PANTHER)|GO:0005634(PANTHER)|GO:0006357(PANTHER) | |
Tan02g1223 | 1094 | MobiDBLite | consensus disorder prediction | 147 | 189 | - | - | |
Tan02g1223 | 1094 | Gene3D | - | 673 | 821 | IPR036770 | - | |
Tan02g1223 | 1094 | FunFam | Calmodulin-binding transcription activator 2 | 917 | 965 | - | - | |
Tan02g1223 | 1094 | SUPERFAMILY | E set domains | 509 | 593 | IPR014756 | - | |
Tan02g1223 | 1094 | SUPERFAMILY | Ankyrin repeat | 691 | 803 | IPR036770 | - | |
Tan02g1223 | 1094 | Gene3D | - | 918 | 965 | - | - | |
Tan02g1223 | 1094 | ProSiteProfiles | CG-1 DNA-binding domain profile. | 15 | 141 | IPR005559 | GO:0003677(InterPro) | |
Tan02g1223 | 1094 | SMART | CG_1_2 | 18 | 136 | IPR005559 | GO:0003677(InterPro) | |
Tan02g1223 | 1094 | FunFam | Calmodulin-binding transcription activator 2 | 502 | 597 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan01g1411 | Tan-Chr1:14012036 | Tan02g1223 | Tan-Chr2:30872441 | 1.60E-199 | dispersed | |
Tan01g1412 | Tan-Chr1:14012036 | Tan02g1223 | Tan-Chr2:30872441 | 3.30E-200 | dispersed | |
Tan02g1223 | Tan-Chr2:30872441 | Tan10g1109 | Tan-Chr10:10702276 | 7.40E-139 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26741 | PF03859 | CG-1 | 3.00E-50 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1223 | K21596 | - | csv:101203707 | 1835.46 |