Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1246 ATGGGGACGGGGAAAGTTGGTTACAGTTCAATGGTGATTTTGGTTCTATCTGGAGCGGTACTGGTGGTTGGGTTTGCGGGCACCGGCGTGCATGGGAAAGGCACACGCCTGGGCTTCTACCTGAGGAGGTGCCCTGAAGCGGAATCAATCGTTAGATCCACCGTCCAATCCCATATTGTAATGGATCCATCGGTCGCTCCTGGACTATTGAGAATGCACTTCCATGACTGCTTTGTTCGAGGATGTGATGCTTCTGTGCTTATTTCTGGTCCCAATACTGAGAGGACGGCTGTCCCTAACCTTACTTTGAGAGGGTTTGAGGTCATTGACGATGCTAAGTCAAAGCTCGAAGATGTCTGCCCTGGTGTCGTCTCCTGCGCTGATATTCTTGCTCTTGCTGCTCGTGACTCCGTTGTTTTGACGGGTGGATTAAGTTGGGAAGTGCCAACAGGACGTAGAGATGGCAGAGTTTCATTGGTTTCAGAGGTAAGGTTGCCCAGTTTTTCAGATTCCATTGAAGTTCAGAAGCAGAAGTTCAGCGATAAAGGTCTCAACACCAATGACCTCGTCACTCTCGTGGGTGCCCATACCATCGGTACAGCATCATGTCGTTTTTTCAGTTACAGACTCTACAACTTCACCACGACCACCCCAACCGGCGCCGACCCGACCATTAACCCGTCACTTGTCGGTCAGCTACGAGCTCTTTGCCCTGAAGATGGAGATGGCTCCAACAGGGTTGAAATCGACATTGGTAGTCCTGAAAGGTTCGACGTGTCATTCTACTCAAACTTGAGACGTGGGGGTGGGATCTTGGAGTCTGATCAAATGCTGTGGAATGATGGCTCTACTCGACCTATCGTTCGAAATTACATTGGTTCGAGAAGTTCAATGGGGCGTTCGAGCTTTAGAGTTGAGTTTGGTAGATCCATGGTTAAAATGAGCAACATTCAAGTGAAAACTGGCATTCAGGGTGAAATCCGTAGGGTCTGCTCTCAAGTTAATTGA 1008 49.11 MGTGKVGYSSMVILVLSGAVLVVGFAGTGVHGKGTRLGFYLRRCPEAESIVRSTVQSHIVMDPSVAPGLLRMHFHDCFVRGCDASVLISGPNTERTAVPNLTLRGFEVIDDAKSKLEDVCPGVVSCADILALAARDSVVLTGGLSWEVPTGRRDGRVSLVSEVRLPSFSDSIEVQKQKFSDKGLNTNDLVTLVGAHTIGTASCRFFSYRLYNFTTTTPTGADPTINPSLVGQLRALCPEDGDGSNRVEIDIGSPERFDVSFYSNLRRGGGILESDQMLWNDGSTRPIVRNYIGSRSSMGRSSFRVEFGRSMVKMSNIQVKTGIQGEIRRVCSQVN 335
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32234625 32236855 + Tan0014329.1 Tan02g1246 743872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1246 335 ProSitePatterns Peroxidases proximal heme-ligand signature. 188 198 IPR019793 -
Tan02g1246 335 Pfam Peroxidase 51 292 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PANTHER PEROXIDASE 25-RELATED 22 331 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Plant peroxidase signature 104 117 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 SUPERFAMILY Heme-dependent peroxidases 36 335 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 FunFam Peroxidase 166 314 - -
Tan02g1246 335 CDD secretory_peroxidase 36 334 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Tan02g1246 335 PRINTS Haem peroxidase superfamily signature 188 203 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 FunFam Peroxidase 38 179 - -
Tan02g1246 335 Gene3D - 38 335 - -
Tan02g1246 335 ProSiteProfiles Plant heme peroxidase family profile. 34 335 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Tan02g1246 335 Gene3D Peroxidase, domain 2 166 314 - -
Tan02g1246 335 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1246 Tan-Chr2:32234625 Tan09g1405 Tan-Chr9:66177062 9.00E-96 dispersed
Tan02g1246 Tan-Chr2:32234625 Tan02g1248 Tan-Chr2:32272016 3.30E-130 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1246 K00430 - csv:101202985 501.901