Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1254 ATGAGCGGGAGGATCGTGAGCGATGAGGGCACGGGGCAGTCGGAGCGACGAAGCGAGGTGGTGAGCGTGGCGCCATTGCCAAAGGTGGGCGTGCCGCCGAGGAAGAATGTGTGGGAGGAGTTCAAATCTGTGGTGAGTGAGACGTTCTTCTCTGATCAGCCTCTTCGCCCTTTCAAAGACCAACCCAAAGGCAGGAAGTTTGCTCTCTTTGTCCAAGGTCTCTTCCCCATATTCCAATGGGGAAGAGGATACAATTTTAGTAAGTTCAAAGGAGACCTCATCGCTGGTCTCACTATTGCCAGTCTCTGCATTCCTCAAGACATTGGTTACGCTAAGCTTGCCAATTTGCCCGCTGAAAATGGACTTTACAGTAGCTTCGTCCCGCCACTGGTGTATGCAGTAATGGGGAGCTCTAGAGATATTGCGATTGGCCCCGTTGCTGTCGTGTCGCTTTTGCTCGGGACACTTCTGCAGCAGGAGTACGACTCGGTGAAAGAAGCGGAGCAGTACAAGAGGCTGGCTTTCACGGCGACTTTCTTTGCCGGAGTAACTCAGTTGGCTCTAGGGTTCCTCCGGCTGGGATTCTTGATTGACTTTTTGTCGCATGCCGCCATTGTCGGGTTTATGGGCGGCGCCGCCGTCACCATCGCCCTTCAGCAGCTCAAAGGTCTCCTCGGCGTAGCAAACTTCACAAAGAAAACTGATATCATTTCTGTGATGCGCTCTGTTTGGAGTAATGTGCACCATGGGTGGAACTGGCAAACTATACTCATAGGCGTTTCATTCTTGGTCTTTCTTCTGGCTACCAAATACATTGGCAAGAAAAATAAGAAACTCTTTTGGATACCTGCCATTGCCCCTTTAACATCCGTTATACTGTCGACATTTTTTGTTTACATTACTCGAGCAGATAAACACGGAGTTCAAATTGTGAGAAACATAAAGAAAGGAATAAATCCACCATCCCTTGATGAGATATTCTTCCATGGAGACAATCTAACTAAAGGTTTCAAGATTGGAGTGGTTGCTGGTTTAATTGGCCTCACGGAAGCAGTGGCGATTGCAAGAACATTTGCAGACCTAAAGGACTACGAGATTGATGGTAACAAAGAAATGATGGCTCTTGGAACAATGAACATTGCTGGTTCCATGACTTCTTGCTATGTAGCCACAGGGTCGTTCTCCCGGTCGGCGGTGAACTTCATGGCTGGCTGCAGCACACCGGTGTCGAACATCGTCATGGCATGCGTCGTTCTCCTAACCTTGGAGCTCATCACACCCCTTTTCAAGTACACCCCCAATGCCATTCTTGCCTCCATCATCATCACTGCCGTTATCGGCCTCATCGACATTGATGCCGTGATTTTGCTATGGAAGATCGACAAATTCGACTTCATTGCCTGCATGGGAGCTTTCTTCGGCGTCGTCTTCGATTCTGTTGAGATCGGCCTTCTCATTGCTGTTAGTCTATCGTTGTTCAAAATCCTATTGCAAGTGACGAGACCGCGCATTGCGTTGCTTGGGAAGCTCCCAAAGATTGCCATTTTTAGAAACATTCTGCAGTACCCTGGAGCTAATAGAATTGAAGGAGTTCTAATGGTTAGAATTGATTCTTCCATATACTTCTCCAATGCAAACTATGTCAAAGAAAGGATATTGAGATGGCTAGCAGATGAAACAGAGAAGCTAGGAGACCAATCTCTGCCGATCAAAGTCGTGGTCGTCGACATGTCTCCCGTATCCGATATCGACACGAGTGGCATCCACGCCTTGGAGGGATTGCACACTCATTTGCTGAAGAAGGAAATTGAACTTGCACTTGCAAATCCAGGCCCAGTGATCATGGAGAAGCTCTTAGCTGCAGACTTCGACAAGCTCATTGGAGAACACAACATTTTCCTTAGTGTCAACGAAGCTATTAAGACTTATGCCCCAAATGATGCTCTTGATCCTTAA 1956 47.8 MSGRIVSDEGTGQSERRSEVVSVAPLPKVGVPPRKNVWEEFKSVVSETFFSDQPLRPFKDQPKGRKFALFVQGLFPIFQWGRGYNFSKFKGDLIAGLTIASLCIPQDIGYAKLANLPAENGLYSSFVPPLVYAVMGSSRDIAIGPVAVVSLLLGTLLQQEYDSVKEAEQYKRLAFTATFFAGVTQLALGFLRLGFLIDFLSHAAIVGFMGGAAVTIALQQLKGLLGVANFTKKTDIISVMRSVWSNVHHGWNWQTILIGVSFLVFLLATKYIGKKNKKLFWIPAIAPLTSVILSTFFVYITRADKHGVQIVRNIKKGINPPSLDEIFFHGDNLTKGFKIGVVAGLIGLTEAVAIARTFADLKDYEIDGNKEMMALGTMNIAGSMTSCYVATGSFSRSAVNFMAGCSTPVSNIVMACVVLLTLELITPLFKYTPNAILASIIITAVIGLIDIDAVILLWKIDKFDFIACMGAFFGVVFDSVEIGLLIAVSLSLFKILLQVTRPRIALLGKLPKIAIFRNILQYPGANRIEGVLMVRIDSSIYFSNANYVKERILRWLADETEKLGDQSLPIKVVVVDMSPVSDIDTSGIHALEGLHTHLLKKEIELALANPGPVIMEKLLAADFDKLIGEHNIFLSVNEAIKTYAPNDALDP 651
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32892616 32897525 - Tan0015577.1 Tan02g1254 743880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1254 651 FunFam Sulfate transporter 31 501 646 - -
Tan02g1254 651 Pfam STAS domain 523 639 IPR002645 -
Tan02g1254 651 NCBIfam sulfate permease 76 639 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g1254 651 ProSiteProfiles STAS domain profile. 521 643 IPR002645 -
Tan02g1254 651 Pfam Sulfate permease family 89 470 IPR011547 GO:0016020(InterPro)
Tan02g1254 651 Gene3D STAS domain 516 647 IPR036513 -
Tan02g1254 651 CDD STAS_SulP_like_sulfate_transporter 522 636 - -
Tan02g1254 651 PANTHER SULFATE TRANSPORTER 64 641 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g1254 651 SUPERFAMILY SpoIIaa-like 527 642 IPR036513 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1254 Tan-Chr2:32892616 Tan11g1359 Tan-Chr11:11899646 4.00E-257 dispersed
Tan02g1254 Tan-Chr2:32892616 Tan02g1255 Tan-Chr2:32981324 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1254 K17470 - csv:101202746 1150.58