Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1255 ATGAGCGGGAGGATCGTGAGCGATGAGGGCATGGGGCAGTCGGAGCGACGAAGCGAGGTGGTGAGCGTGGCGCCATTGCCAAAGGTGGGCGTGCCGCCGAGGAAGAATGTGTGGGAGGAGTTCAAATCTGTGGTGAGTGAGACGTTCTTCTCTGATCAGCCTCTTCGCCCTTTCAAAGACCAACCCAAAGGCAGGAAGTTTGCTCTCTTTGTCCAAGGTCTCTTCCCCATATTCCAATGGGGAAGAGGATACAATTTTAGTAAGTTCAAAGGAGACCTCATCGCTGGTCTCACTATTGCCAGTCTCTGCATTCCTCAAGACATTGGTTACGCTAAGCTTGCCAATTTGCCCGCTGAAAATGGACTTTACAGTAGCTTCGTCCCGCCACTGGTGTATGCAGTAATGGGGAGCTCTAGAGATATTGCGATTGGCCCCGTTGCTGTCGTGTCGCTTTTGCTCGGGACACTTCTGCAGCAGGAGTACGACTCGGTGAAAGAAGCGGAGCAGTACAAGAGGCTGGCTTTCACGGCGACTTTCTTTGCCGGAGTAACTCAGTTGGCTCTAGGATTCCTCCGGCTTGGATTCTTGATTGACTTTTTGTCGCATGCCGCCATTGTCGGGTTTATGGGCGGCGCCGCCGTCACCATCGCCCTTCAGCAGCTGAAAGGTCTCCTCGGCGTAGCAAACTTCACAAAGAAAACTGATATCATTTCTGTGATGCGCTCTGTTTGGAGTAATGTGCACCATGGGTGGAACTGGCAAACTATACTCATAGGCGTTTCATTCTTGGTCTTTCTTCTGGCTACCAAATACATTGGCAAGAAAAATAAGAAACTCTTTTGGATACCTGCCATTGCCCCTTTAACATCCGTTATACTGTCGACATTTTTTGTTTACATTACTCGAGCAGATAAACACGGAGTTCAAATTGTGAGAAATATAAAGAAAGGAATAAATCCACCATCCCTTGATGAGATATTCTTCCATGGAGACAATCTAACTAAAGGTTTCAAGATTGGAGTGGTTGCTGGTTTAATTGGCCTCACGGAAGCAGTGGCGATTGCAAGAACATTTGCAGACCTAAAGGACTACGAGATTGATGGTAACAAAGAAATGATGGCTCTTGGAACAATGAACATTGCTGGTTCCATGACTTCTTGCTATGTAGCCACAGCTCATCACACCCCTTTTCAAGTACACCCCAATGCCATTCTTGCCTCCATCATCATCACTGCCGTTATCGGCCTCATCGACATTGATGCCGTGATTTTGCTATGGAAGATCGACAAATTCGACTTCATTGCCTCGCATGGGAGCTTTCTTGGCGCCGCCTTCGATTCTGTTGAGATCGGTCTTCTCATTGCTGTTAGTCTATCGTTGTTCAAAATCCTATTGCAAGTGACGAGACCGCGCATTGCAAACATTCTGCAGTACCCTGGAGCTAATAGAATTGAAGGAGTTCTAATGGTTAGAATTGATTCATCCATATACTTCTCCAATGCAAACTATGTCAAAGAAAGGATATTGAGATGGCTAGCAGATGAAACAGAGAAGCTAGGAGACCAATCTCTGCCGATCAAAGTCGTGGTCGTCGACATGTCTCCTGTATCCGATATCGACACAAGTGGCATCCACGCCTTGGAGGGATTGCACACTCATTTGCAGAAGAAGGAAATCCAACTTGCACTTGCAAATCCAGGCCCAGTGATCATGGAGAAGCTCTTAGCTGCAAAATTTGACCAGTTCATTGGAGAAGACAACATTTTCCTCAGTGTCCACGAAGCTATTAAGATTTATGCCCCAAATTCTACTCTTGATCCTTAA 1824 46.82 MSGRIVSDEGMGQSERRSEVVSVAPLPKVGVPPRKNVWEEFKSVVSETFFSDQPLRPFKDQPKGRKFALFVQGLFPIFQWGRGYNFSKFKGDLIAGLTIASLCIPQDIGYAKLANLPAENGLYSSFVPPLVYAVMGSSRDIAIGPVAVVSLLLGTLLQQEYDSVKEAEQYKRLAFTATFFAGVTQLALGFLRLGFLIDFLSHAAIVGFMGGAAVTIALQQLKGLLGVANFTKKTDIISVMRSVWSNVHHGWNWQTILIGVSFLVFLLATKYIGKKNKKLFWIPAIAPLTSVILSTFFVYITRADKHGVQIVRNIKKGINPPSLDEIFFHGDNLTKGFKIGVVAGLIGLTEAVAIARTFADLKDYEIDGNKEMMALGTMNIAGSMTSCYVATAHHTPFQVHPNAILASIIITAVIGLIDIDAVILLWKIDKFDFIASHGSFLGAAFDSVEIGLLIAVSLSLFKILLQVTRPRIANILQYPGANRIEGVLMVRIDSSIYFSNANYVKERILRWLADETEKLGDQSLPIKVVVVDMSPVSDIDTSGIHALEGLHTHLQKKEIQLALANPGPVIMEKLLAAKFDQFIGEDNIFLSVHEAIKIYAPNSTLDP 607
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 32981324 32986206 - Tan0007959.1 Tan02g1255 743881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1255 607 CDD STAS_SulP_like_sulfate_transporter 478 592 - -
Tan02g1255 607 Pfam STAS domain 479 595 IPR002645 -
Tan02g1255 607 SUPERFAMILY SpoIIaa-like 483 598 IPR036513 -
Tan02g1255 607 NCBIfam sulfate permease 76 392 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Tan02g1255 607 Gene3D STAS domain 472 602 IPR036513 -
Tan02g1255 607 ProSiteProfiles STAS domain profile. 477 599 IPR002645 -
Tan02g1255 607 Pfam Sulfate permease family 397 435 IPR011547 GO:0016020(InterPro)
Tan02g1255 607 Pfam Sulfate permease family 89 392 IPR011547 GO:0016020(InterPro)
Tan02g1255 607 PANTHER SULFATE TRANSPORTER 65 392 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1255 Tan-Chr2:32981324 Tan11g1359 Tan-Chr11:11899646 6.00E-223 dispersed
Tan02g1254 Tan-Chr2:32892616 Tan02g1255 Tan-Chr2:32981324 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1255 K17470 - csv:101202746 1025.39