Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1268 ATGAATCATTTTAAATTATTTTTAAAAATATGGCCTACAATAATTTGCAAGACAAAAAAGTCTACATTATTTAGACTAAACAACAGAAATCCCACTAAAAATGAAAAGCCAAAATCACGTTCAGTTAAAAAAACTAAAAATCAAGCTAAAAATGTACATTATCAGACTCGAACGCGGGCAAAGAGGGCTGATGGGGGCTTGCCCACTACACCAAAGAACTTTTTGTATATTTGTGATGGTGCTAATGGAATTATTGTTGGAACAATTGTTGCTGCTGCTGCTTTTCTCGTTGTTGTGCCTGTTATTGCATTTACTCTTTCGCGACGAAAAACTCGACCAGATCATTTCTTTGATGTACCTGCTGAAGAAGATCCTGAAGTTAACCTGGGGCAGCTCAAAAAATACTCTCTACGCGAGCTGCAAGTTGCCACTGATTATTTTAGCCAACAGAACATTTTGGGCAAAGGTGGATTTGGCAAGGTCTATAAAGGTCGTTTGACTGATGGTTCTCTTGTGGCTGTAAAACGACTGAAAGAGGAGCGTGCCAAGGGTGGGGAGCTTCAATTTCAGACTGAAGTAGAGATGATCAGCATGGCTGTCCATCGTAATCTACTTCGTCTAAATGGCTTTTGCATGTCACCAACTGAACGATTGCTTGTATATCCCTATATGGCTAATGGAAGTCTAGCATCATGTTTAAGAGAGCGTAAGCAATGCCAGCCACCACTCAACTGGGCAATACGTAAACAAGTTGCCTTGGGGGCTGCACGAGGACTTGAATATTTACACAATCATTGTGATCCTAAAATTATTCACCGGGATGTGAAAGCTGCAAATATATTATTAGATGATGAATTTGAAGCTGTTGTTGGAGATTTTGGGTTGGCTAAACTCATGAACTACAAGGATACTCATGTCACAACTGCTGTTCGTGGAACAATTGGGCATATAGCACCTGAATACCTCTCGTCTGGAAAGTCTTCTGAAAAAACTGATGTTTTTGGTTATGGAGTAATGCTTCTTGAACTCGTAACTGGACAGAAAGCCTTTGATCTTGCTCGGTTTGCAAAAGACAACGATGTCATGTTGCTTGATTGGGTAAAAGGACTTCTGAATGATAAGAAACTGGAAAGATTGGTCGATTCCGATCTCGGGGTCAATTACGTAGAGGAAGAAGTGGAGCAGCTAATTCAAGTTGCACTACTTTGCACACAAAGCTCCCCTGTGGAGAGACCGAAGATGTCAGAGGTGTTGCAAATGCTGGAAGGCAATGGTTTGGCTGAACGATGGGAGGAATGGCAGAAAGAAGAGAGCTCACGCCAAAACTTCAACATTATGGTCCATTCTTACCACCCGAATACAACTCTCCAGGTTTTGGATTCCACCTCTCGTATTGAACCTGATGTGTTGTCTGGTCCAAGATAG 1425 41.33 MNHFKLFLKIWPTIICKTKKSTLFRLNNRNPTKNEKPKSRSVKKTKNQAKNVHYQTRTRAKRADGGLPTTPKNFLYICDGANGIIVGTIVAAAAFLVVVPVIAFTLSRRKTRPDHFFDVPAEEDPEVNLGQLKKYSLRELQVATDYFSQQNILGKGGFGKVYKGRLTDGSLVAVKRLKEERAKGGELQFQTEVEMISMAVHRNLLRLNGFCMSPTERLLVYPYMANGSLASCLRERKQCQPPLNWAIRKQVALGAARGLEYLHNHCDPKIIHRDVKAANILLDDEFEAVVGDFGLAKLMNYKDTHVTTAVRGTIGHIAPEYLSSGKSSEKTDVFGYGVMLLELVTGQKAFDLARFAKDNDVMLLDWVKGLLNDKKLERLVDSDLGVNYVEEEVEQLIQVALLCTQSSPVERPKMSEVLQMLEGNGLAERWEEWQKEESSRQNFNIMVHSYHPNTTLQVLDSTSRIEPDVLSGPR 474
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 34024371 34033996 + Tan0016041.1 Tan02g1268 743894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1268 474 SMART serkin_6 147 421 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1268 474 SUPERFAMILY Protein kinase-like (PK-like) 128 422 IPR011009 -
Tan02g1268 474 ProSiteProfiles Protein kinase domain profile. 147 434 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1268 474 Pfam Protein tyrosine and serine/threonine kinase 149 421 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g1268 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 270 282 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g1268 474 Gene3D Transferase(Phosphotransferase) domain 1 224 441 - -
Tan02g1268 474 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 50 455 - -
Tan02g1268 474 ProSitePatterns Protein kinases ATP-binding region signature. 153 175 IPR017441 GO:0005524(InterPro)
Tan02g1268 474 Gene3D Phosphorylase Kinase; domain 1 116 223 - -
Tan02g1268 474 FunFam Somatic embryogenesis receptor kinase 1 116 223 - -
Tan02g1268 474 FunFam Somatic embryogenesis receptor-like kinase 1 224 441 - -
Tan02g1268 474 MobiDBLite consensus disorder prediction 27 65 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1268 Tan-Chr2:34024371 Tan10g1711 Tan-Chr10:43391278 3.00E-169 dispersed
Tan02g1268 Tan-Chr2:34024371 Tan09g1285 Tan-Chr9:65032981 2.40E-70 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67212 PF00069 Pkinase 4.30E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1268 K13416 - csv:101216386 671.003