Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1320 ATGGTCATTGGCGACGGCATCCTAACGCCTGCTATTTCTGTTTTTTCTGCTGTTTCTGGACTGGAGTTTACGATGTCAAAAGAGCATCACAAGTATGTGGAAGTTCCAGCTGCATGCATCATACTGATAGGCCTGTTCGCCCTTCAACATTATGGAACCCACAGGGTTGGATTCTTGTTTGCTCCTATAGTTACAACATGGCTTTTGTGCATTAGTGCAATTGGTTTATACAATGTTATCCACTGGAACCCTCATGTTTATCAAGCACTTTCACCTTATTATATGTTCCAATTCTTGAAGAAAACACAGAGAGGAGGTTGGATGTCACTAGGAGGGATTCTACTTTGTATAACTGGTTCAGAGGCTATGTTTGCTGATCTTGGACACTTTTCACAATCATCCATCCAGATTGCATTTAGCTTTATGGTCTATCCATCTTTGGTTTTGGCATATATGGGGCAGGCTGCTTATCTATCTCAACATCATTCAATACCAAATGATTATCGAATTGGATTCTATATATCTGTTCCAGAGAAGTTACGTTGGCCTGTTCTAGTAATTGCCATACTTGCTGCTGTAGTAGGAAGCCAGGCCATCATCACTGGAACTTTCTCGATCATTAAGCAATGCTCTGCTTTGAATTGCTTCCCTAGAGTCAAAATAGTTCATACATCATCTAAAATTCATGGTCAAATTTATATCCCTGAGATTAATTGGATCTTGATGCTGTTATGCTTAGCTGTTACAATTGGTTTCCGAGACACAAAGCGTTTGGGAAATGCATCAGGCTTGGCAGTAATCACAGTGATGTTAGTCACTACCTGCTTAATGTCTTTAGTCATTGTCCTTTGCTGGCACCAGAGTGTTGTCTTGGCAATTTGCTTTGTGCTCTTCTTTGGGTCAATTGAAGCCATGTATTTTTCAGCTTCTCTCATTAAGTTTCTAGAAGGAGCATGGGTTCCCATTGTGCTTGCGATGGTGTTCATGATTATAATGTCTGTCTGGCACTACGGAACGCTGAAGAAGTACGAATTCGATTTTCAAAATAAGGTGTCAATTAATTGGTTGCTTAGTGTGGGATCCAGTCTAGGCATTGTACGAGTGCGGGGGATTGGCATTGTGCACACTGAACTTGTGTCAGGAATCCCAGCAATTTTTCCACATTTCATTACGAACCTTCCTGCCTTTCACCAGGTGGTTGTTTTTCTTTGCATCAAATCTGTCCCAGTTCCACACGTTAAAGCTGAAGAGCGGTTCCTAGTTAGTCGAATTGGACCTGGTGAGTTTAGGTTGTATAGGTGCATTGTGCGATATGGATACAGAGATGTGCACAAGGATGATACAGAGTTTGAAAAAGATCTTGTATGTAGTATAGCTGAGTTCATAAGATGGGAGAAAATGGAATCCAGAGGTTGTAATGCAGCAGCAGATGATCCAGTGGTTGTAGTTGGAACGTGTTGTACACATAGAGATGGAATTCAAATGCAAGAGGAAGAGTTGGGTGACAACGACGCATCGGATTCGGAGCAGAGGGAAATAAGGTCACCAGGTATTGTCGAACCACTGAGAACGAGGAAAAGGGTGAGGTTCGTTGTGCCAGAGAGTCCAAAAATTGAGCAGACAGCAATGGAGGAACTGCAGGAGTTGATGGAAGCAAGGGAAGCAGGAGTTGCTTACATATTGGGTCACGCGCATACGAAATCAAAGCGGGGATCGAGCATGCTAAGAAAGCTTGTTATTAATTATGGTTATGAATTGTTTAGGAGAAATAGCAGGGAGCCCAGCTATCCCCTCAATTTACCACATGCGTCCACTCTTGAGGTAGGAATGATGTATCATATCTGA 1845 42.28 MVIGDGILTPAISVFSAVSGLEFTMSKEHHKYVEVPAACIILIGLFALQHYGTHRVGFLFAPIVTTWLLCISAIGLYNVIHWNPHVYQALSPYYMFQFLKKTQRGGWMSLGGILLCITGSEAMFADLGHFSQSSIQIAFSFMVYPSLVLAYMGQAAYLSQHHSIPNDYRIGFYISVPEKLRWPVLVIAILAAVVGSQAIITGTFSIIKQCSALNCFPRVKIVHTSSKIHGQIYIPEINWILMLLCLAVTIGFRDTKRLGNASGLAVITVMLVTTCLMSLVIVLCWHQSVVLAICFVLFFGSIEAMYFSASLIKFLEGAWVPIVLAMVFMIIMSVWHYGTLKKYEFDFQNKVSINWLLSVGSSLGIVRVRGIGIVHTELVSGIPAIFPHFITNLPAFHQVVVFLCIKSVPVPHVKAEERFLVSRIGPGEFRLYRCIVRYGYRDVHKDDTEFEKDLVCSIAEFIRWEKMESRGCNAAADDPVVVVGTCCTHRDGIQMQEEELGDNDASDSEQREIRSPGIVEPLRTRKRVRFVVPESPKIEQTAMEELQELMEAREAGVAYILGHAHTKSKRGSSMLRKLVINYGYELFRRNSREPSYPLNLPHASTLEVGMMYHI 614
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 40707206 40713242 - Tan0003150.2 Tan02g1320 743946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1320 614 Pfam K+ potassium transporter C-terminal domain 370 614 IPR053952 -
Tan02g1320 614 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 1 614 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan02g1320 614 NCBIfam potassium uptake protein 1 614 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Tan02g1320 614 Pfam K+ potassium transporter integral membrane domain 1 357 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1320 Tan-Chr2:40707206 Tan02g1322 Tan-Chr2:41279521 4.40E-298 dispersed
Tan02g1319 Tan-Chr2:40707206 Tan02g1320 Tan-Chr2:40707206 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1320 K03549 - rcu:8261016 997.653