Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1374 ATGGCTTCATTCCATGCAGAAGCTTCTGAGTCTGGCAGTGTTGATTATGCTCAACGAGCCCAGTGGCTCCGAGCAGCGGTTCTCGGGGCCAACGATGGGCTCGTCTCCGTTGCGTCGCTGATGATGGGCGTTGGAGCTGTGAAGCCCGACGCCAAGGCCATGCTTATTGCTGGATTTGCAGGGCTGGTTGCTGGAGCTTGCAGCATGGCGATTGGAGAGTTTGTCTCGGTTTACACCCAATATGACATAGAGAAAGCTCAGCTGAAGAGAGATGGGAAGCAAAAGAATGGTGTCATGCAATCCAACCACCCAGCAGCTGGGGCGGTCGAGGAAGAGAAGCTGCCAAATCCATTGCAGGCTACGATTGCATCAGCGATTGCGTTTTCGGTCGGAGCAGTCATTCCTTTGCTGGCGGCAGTGTTTATACACAACCATAAGGTGAGGCTCGGCGTGGTTGCGGGGGTGGCGAGCTTGACGCTGGTGGTTTTCGGAGGAGTCGGAGCCATCTTGGGGAGGACTTCGATCGGGAAATCGGCAGCGAGAGTGCTTGTTGGAGGGTGGATGGCTATGGCCATCACCTTTGGACTTACAAAGCTGCTTGGTTCGAAGGGACTGTGA 618 55.18 MASFHAEASESGSVDYAQRAQWLRAAVLGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQLKRDGKQKNGVMQSNHPAAGAVEEEKLPNPLQATIASAIAFSVGAVIPLLAAVFIHNHKVRLGVVAGVASLTLVVFGGVGAILGRTSIGKSAARVLVGGWMAMAITFGLTKLLGSKGL 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 46449382 46450759 + Tan0010282.1 Tan02g1374 744000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1374 205 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 8 201 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(InterPro)|GO:0030026(PANTHER)
Tan02g1374 205 Pfam VIT family 110 197 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Tan02g1374 205 Pfam VIT family 23 93 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1374 Tan-Chr2:46449382 Tan11g1146 Tan-Chr11:9052411 3.40E-61 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1374 K22736 - csv:101214875 332.028