Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1430 | ATGGCTTCTCCGTCTCCTTCCCTAATGGGGATTAAAGTTTCAAAGCCGAGTACTACTCAAGGAGGGAAGGTGGAACAGCTAAGTCTGCAACACCACCTAATAAATTATCTATCAAAAAGCTTTTACATACGAAACTTAGTTTCAAAGAAAAGGAGACGAATGCTTGTTGGTGGGTATGATCTTGACATGTCTTATATTACAGATCATGTTCTGGCAATGTCATTCCCTGCAGAACGTATGCGTGCTATGTATCGTAATCCCCTTTGGCAGGTTAAATCAATCTATAATCTCTGCATTGAACAAACCTATGATCCATCTCATTTTCATGGTCGTGTTGAGTTGTTTCCTTTCGATGATAATCATGTTCCTCCTCTACACATGATCAAACTTTTCTGTCAAAATGTCTCCTCCTGGCTATCCTCCCACCCAAAGAATATTGCAGTTGTACATTGCATGGCTGGAAAAGGTCGAACCGGACTCATGGTATGTGCCTACTTGGTGTACTGTGGTATGTCTGTCGATGATGCTCTTCAGCTCTATGCCCAAAGGCGGACAACCAATAATGAAGGAGTATCAATTCCAAGCCAACGACGGTATGTGGGCTACTGGGCAAAGTGCCTTTCCTTTCCCAAGGGGGCATATCCTGAGGTCAAGTTGCCCCAACGCTGTACCAGAGAGTTGCAGAGAATTCGTCTTTATGATACACTTAACACAGAATCAATTTTCTTTGTCGTCTCAGAATTGCAGGAGGTTCCTTCTCAGCTATACCGTCCATCTATGGAACTAACGAGGAGTCGTTGCAGACAATTTAAGAGAGGTTATGAAAGAAGTAACAGTCCACGTTACTTTATATCTTTTGTGGAAGACGATACCGAAGGGAACAAGCCAGAACTGGAACCCCATCTTGTTGTTCAAATGGATACCGAGTGTTCAGCACTGTACCACAAAACCTGCCTTGACTATAATTTTGAGAAGCCTCTCCCACTAACTGGAGATGTTCGCATCATATTCTACGCAAAGATGTTAGGAGGGCGTCTCTTCTATGCTTGCTTCAACACTGCTTTCATTCAAAACAGCTTGCTACAGCTAAGGTTGCAGGATTTGGACAAAGTTGGGAAAAAGGGAAGGTCAATTTGTGGTCCTTCCTTCTGCTTGGAGTTGGTATTCGGTCCTGCGAATGCGAAACACTCATTTTCGACTTCATCATATGAAAAAGATCCTAGTGATCATGACATGTCTTAA | 1242 | 42.91 | MASPSPSLMGIKVSKPSTTQGGKVEQLSLQHHLINYLSKSFYIRNLVSKKRRRMLVGGYDLDMSYITDHVLAMSFPAERMRAMYRNPLWQVKSIYNLCIEQTYDPSHFHGRVELFPFDDNHVPPLHMIKLFCQNVSSWLSSHPKNIAVVHCMAGKGRTGLMVCAYLVYCGMSVDDALQLYAQRRTTNNEGVSIPSQRRYVGYWAKCLSFPKGAYPEVKLPQRCTRELQRIRLYDTLNTESIFFVVSELQEVPSQLYRPSMELTRSRCRQFKRGYERSNSPRYFISFVEDDTEGNKPELEPHLVVQMDTECSALYHKTCLDYNFEKPLPLTGDVRIIFYAKMLGGRLFYACFNTAFIQNSLLQLRLQDLDKVGKKGRSICGPSFCLELVFGPANAKHSFSTSSYEKDPSDHDMS | 413 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 54750054 | 54753769 | - | Tan0008459.1 | Tan02g1430 | 744056 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1430 | 413 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 294 | 391 | IPR035892 | - | |
Tan02g1430 | 413 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 41 | 395 | IPR051281 | GO:0004725(PANTHER)|GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER)|GO:0046856(PANTHER) | |
Tan02g1430 | 413 | Gene3D | Protein tyrosine phosphatase superfamily | 39 | 209 | IPR029021 | - | |
Tan02g1430 | 413 | Pfam | C2 domain of PTEN tumour-suppressor protein | 313 | 390 | IPR014020 | - | |
Tan02g1430 | 413 | SMART | PTEN_C2_2 | 220 | 391 | IPR014020 | - | |
Tan02g1430 | 413 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 149 | 159 | IPR016130 | GO:0016311(InterPro) | |
Tan02g1430 | 413 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 129 | 184 | IPR000387 | GO:0016311(InterPro) | |
Tan02g1430 | 413 | Gene3D | - | 262 | 394 | - | - | |
Tan02g1430 | 413 | MobiDBLite | consensus disorder prediction | 1 | 22 | - | - | |
Tan02g1430 | 413 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 52 | 210 | IPR029023 | - | |
Tan02g1430 | 413 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 59 | 205 | IPR029021 | - | |
Tan02g1430 | 413 | ProSiteProfiles | C2 tensin-type domain profile. | 238 | 392 | IPR014020 | - | |
Tan02g1430 | 413 | Pfam | Swiss Army Knife protein, DSP-PTPase phosphatase domain | 90 | 177 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1430 | Tan-Chr2:54750054 | Tan03g1590 | Tan-Chr3:72130673 | 1.70E-35 | dispersed | |
Tan02g1430 | Tan-Chr2:54750054 | Tan02g0941 | Tan-Chr2:11624401 | 1.30E-35 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1430 | K01110 | - | csv:101212127 | 716.072 |