Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1435 ATGGGGTCCTGCTTGTCTGCGGAGAGCAGGAGCCCCATTCCTGGTTCCCCTACCTCTCCATCTAAGCACCATCGAAGCAGCAAGAACAAGAGGCGATATGGTTCTCGGAATTCTTCCTTTGGGGATCTGTCTCTCCTTCGGATCCAAGGCAGGCTGTTCGCCAATGGCTTCACTGATGTCGCCTCTCTCTTCACTCAGCAGGGCAAGAAAGGAACCAATCAGGATGCCATGATTATTTGGGAGAATTTTGGCTCTAGAACTGATACGATCTTCTGTGGGGTTTTCGATGGCCACGGCCCATATGGTCATATGGTTGCAAAGAAAGTAAGGGATTCTCTTCCTCTGAGATTGAGTGCACATTGGGAGGTCAACTTGACCACGGATGATGTTCTTAGAGAGATCAGCCTTAATACTGGAAGCATGAACTCGGATGATGCTACCTCCTTTTTATCTGCCGATGAAGAGTTTAGGGCCTCCGTTGATCATGATGGAACAGAAAAGCAGCCTGAAATTTTCCATACTTTAAAGGAGTCATTTCTTAAGGCTTTTAGAGTTATGGACAGGGAGCTCAGAATGCACCAAACAATAGATAGCTTCTGTAGTGGGACTACAGCAGTGACTTTGGTTAAACAGGGTCAGGATCTTGTCATTGGAAACGTTGGGGACTCCCGTGCTGTTTTGGGTACGAGAGATAGAGATGACTCTCTTGTTGCAGTTCAATTGACTGTGGATCTCAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAAATGTAGAGGTCGTGTCTTCGCTCTCCAAGACGAACCTGATGTTCCTCGAGTTTGGCTTCCGAACAGCAACTCTCCTGGACTTGCCATGGCACGGGCATTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATCTCTGTACCTGAAATATCTTATCGAAGGCTGACTGAAAAAGACGAGTTCATTGTTCTGGCTACAGATGGAATATGGGATGTGTTGTCAAACAAAGAGGTTGTAGATATTGTTGCATCAGCTCCAAAACGGACAACTGCTGCTCGAACTCTGGTCGAGACAGCCATTAAAGCATGGAAACACAAATACCCAACTTCCAAGATTGATGACTGTGCGGTCATTTGCCTCTTCCTCAACTCAAACTCCAGCAATCTATCATCTGCTTCCAGTATCAAAGCAGAAGAGCAACAAAGTTTAGCAGCAGATCAAGTTAGCCCTGCAGTTGAGAATGAAGATCTTTCTGTCCCAAATGGTCTGAGTCGTTCAGGAACCGTCCGGAGCAGCAAGGAAATTTTGCAGGATGGAAGCGAAGAAGAAGATGAATCAAAGGAGGATGAACATTCAGAAACGGGAATAGAATGGTCTGCCTTGGAAGGAGTCTCACGAGTAAACACTTTGGTAAACCTGCCGAGATTTGATCCTGGAAAGGAAGATAAGAAAGGCCGGAAGTAA 1455 46.19 MGSCLSAESRSPIPGSPTSPSKHHRSSKNKRRYGSRNSSFGDLSLLRIQGRLFANGFTDVASLFTQQGKKGTNQDAMIIWENFGSRTDTIFCGVFDGHGPYGHMVAKKVRDSLPLRLSAHWEVNLTTDDVLREISLNTGSMNSDDATSFLSADEEFRASVDHDGTEKQPEIFHTLKESFLKAFRVMDRELRMHQTIDSFCSGTTAVTLVKQGQDLVIGNVGDSRAVLGTRDRDDSLVAVQLTVDLKPNLPAEAERIRKCRGRVFALQDEPDVPRVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVASAPKRTTAARTLVETAIKAWKHKYPTSKIDDCAVICLFLNSNSSNLSSASSIKAEEQQSLAADQVSPAVENEDLSVPNGLSRSGTVRSSKEILQDGSEEEDESKEDEHSETGIEWSALEGVSRVNTLVNLPRFDPGKEDKKGRK 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55688458 55692705 - Tan0000721.1 Tan02g1435 744061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1435 484 CDD PP2Cc 60 376 IPR001932 -
Tan02g1435 484 SUPERFAMILY PP2C-like 60 380 IPR036457 -
Tan02g1435 484 MobiDBLite consensus disorder prediction 403 456 - -
Tan02g1435 484 MobiDBLite consensus disorder prediction 1 36 - -
Tan02g1435 484 MobiDBLite consensus disorder prediction 1 22 - -
Tan02g1435 484 Pfam Protein phosphatase 2C 172 358 IPR001932 -
Tan02g1435 484 PANTHER PROTEIN PHOSPHATASE 36 378 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan02g1435 484 ProSiteProfiles PPM-type phosphatase domain profile. 60 379 IPR001932 -
Tan02g1435 484 MobiDBLite consensus disorder prediction 416 431 - -
Tan02g1435 484 FunFam probable protein phosphatase 2C 33 55 382 - -
Tan02g1435 484 SMART PP2C_4 44 377 IPR001932 -
Tan02g1435 484 Gene3D - 58 382 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g1928 Tan-Chr1:20952623 Tan02g1435 Tan-Chr2:55688458 2.00E-124 dispersed
Tan01g1929 Tan-Chr1:20952623 Tan02g1435 Tan-Chr2:55688458 3.20E-135 dispersed
Tan02g0240 Tan-Chr2:2098199 Tan02g1435 Tan-Chr2:55688458 7.00E-118 dispersed
Tan02g1435 Tan-Chr2:55688458 Tan09g0621 Tan-Chr9:52973373 2.70E-141 dispersed
Tan02g1435 Tan-Chr2:55688458 Tan02g1436 Tan-Chr2:55688458 9.00E-214 tandem
Tan01g4645 Tan-Chr1:112317390 Tan02g1435 Tan-Chr2:55688458 3.60E-79 transposed
Tan03g0745 Tan-Chr3:63352141 Tan02g1435 Tan-Chr2:55688458 2.20E-94 transposed
Tan06g1621 Tan-Chr6:26746414 Tan02g1435 Tan-Chr2:55688458 2.20E-130 transposed
Tan09g0127 Tan-Chr9:5980383 Tan02g1435 Tan-Chr2:55688458 3.20E-86 transposed
Tan02g1435 Tan-Chr2:55688458 Tan08g1276 Tan-Chr8:42487673 3.60E-13 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1435 - - - 0.0