Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1436 ATGGTTGCAAAGAAAGTAAGGGATTCTCTTCCTCTGAGATTGAGTGCACATTGGGAGGTCAACTTGACCACGGATGATGTTCTTAGAGAGATCAGCCTTAATACTGGAAGCATGAACTCGGATGATGCTACCTCCTTTTTATCTGCCGATGAAGAGTTTAGGGCCTCCGTTGATCATGATGGAACAGAAAAGCAGCCTGAAATTTTCCATACTTTAAAGGAGTCATTTCTTAAGGCTTTTAGAGTTATGGACAGGGAGCTCAGAATGCACCAAACAATAGATAGCTTCTGTAGTGGGACTACAGCAGTGACTTTGGTTAAACAGGGTCAGGATCTTGTCATTGGAAACGTTGGGGACTCCCGTGCTGTTTTGGGTACGAGAGATAGAGATGACTCTCTTGTTGCAGTTCAATTGACTGTGGATCTCAAGCCAAATCTTCCAGCTGAAGCAGAGAGAATCCGTAAATGTAGAGGTCGTGTCTTCGCTCTCCAAGACGAACCTGATGTTCCTCGAGTTTGGCTTCCGAACAGCAACTCTCCTGGACTTGCCATGGCACGGGCATTTGGAGATTTCTGCCTCAAAGACTTTGGTCTTATCTCTGTACCTGAAATATCTTATCGAAGGCTGACTGAAAAAGACGAGTTCATTGTTCTGGCTACAGATGGAATATGGGATGTGTTGTCAAACAAAGAGGTTGTAGATATTGTTGCATCAGCTCCAAAACGGACAACTGCTGCTCGAACTCTGGTCGAGACAGCCATTAAAGCATGGAAACACAAATACCCAACTTCCAAGATTGATGACTGTGCGGTCATTTGCCTCTTCCTCAACTCAAACTCCAGCAATCTATCATCTGCTTCCAGTATCAAAGCAGAAGAGCAACAAAGTTTAGCAGCAGATCAAGTTAGCCCTGCAGTTGAGAATGAAGATCTTTCTGTCCCAAATGGTCTGAGTCGTTCAGGAACCGTCCGGAGCAGCAAGGAAATTTTGCAGGATGGAAGCGAAGAAGAAGATGAATCAAAGGAGGATGAACATTCAGAAACGGGAATAGAATGGTCTGCCTTGGAAGGAGTCTCACGAGTAAACACTTTGGTAAACCTGCCGAGATTTGATCCTGGAAAGGAAGATAAGAAAGGCCGGAAGTAA 1146 44.68 MVAKKVRDSLPLRLSAHWEVNLTTDDVLREISLNTGSMNSDDATSFLSADEEFRASVDHDGTEKQPEIFHTLKESFLKAFRVMDRELRMHQTIDSFCSGTTAVTLVKQGQDLVIGNVGDSRAVLGTRDRDDSLVAVQLTVDLKPNLPAEAERIRKCRGRVFALQDEPDVPRVWLPNSNSPGLAMARAFGDFCLKDFGLISVPEISYRRLTEKDEFIVLATDGIWDVLSNKEVVDIVASAPKRTTAARTLVETAIKAWKHKYPTSKIDDCAVICLFLNSNSSNLSSASSIKAEEQQSLAADQVSPAVENEDLSVPNGLSRSGTVRSSKEILQDGSEEEDESKEDEHSETGIEWSALEGVSRVNTLVNLPRFDPGKEDKKGRK 381
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 55688458 55691634 - Tan0000721.2 Tan02g1436 744062
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1436 381 CDD PP2Cc 38 273 IPR001932 -
Tan02g1436 381 Pfam Protein phosphatase 2C 71 255 IPR001932 -
Tan02g1436 381 MobiDBLite consensus disorder prediction 313 328 - -
Tan02g1436 381 SMART PP2C_4 24 274 IPR001932 -
Tan02g1436 381 PANTHER PROTEIN PHOSPHATASE 2 275 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan02g1436 381 Gene3D - 1 288 IPR036457 -
Tan02g1436 381 SUPERFAMILY PP2C-like 68 277 IPR036457 -
Tan02g1436 381 ProSiteProfiles PPM-type phosphatase domain profile. 1 276 IPR001932 -
Tan02g1436 381 MobiDBLite consensus disorder prediction 300 353 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1436 Tan-Chr2:55688458 Tan09g0621 Tan-Chr9:52973373 4.20E-105 dispersed
Tan02g1435 Tan-Chr2:55688458 Tan02g1436 Tan-Chr2:55688458 9.00E-214 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1436 - - - 0.0