Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1465 | ATGCAGAATCATCAGGATATGAACTTAGTTTTGTCTACTGATGCAAAGCCAAGGCTGAAATGGACTCCTGAGCTTCATCAAAGATTTGTTGAAGCTGTCAATCACCTTGGTGGAGCTGATAAAGCCACACCTAAGAGCTTGATGAGAGTGATGGGAATCACTGGCCTCACTCTGTACCACCTCAAGAGCCATTTACAGAAATTCAGGTTGGGAAAAAGCCAACAGTCAGAAACCAATGCCCAACTCAAGCTGGAAGAGATGCAGAGAAAAGATGGGCATTTGAATGGGGAAAACAGCGATGGGAGTCAAAATCATAACACGAACGACATGAAGATAACCGAAGCACTGGAAATGCAATTGGAAGTGCAGAAGAGATTACATGAGCAAATAGAAGTACAAAGGCATTTACAGCTGAGAATCGAAGCACAAGGAAAGTATTTACAGAGAGTGTTAATAAAAGCACAAGAGACAATTACAGGGTACGGATGTTGTTCTGAAGCACTTGAAGAGGCCAAGGCCGAGCTCTCCCAATTGGCTTCAATGGTGAGCTCTGGATGCCAGAGTTCTTCATTGTCAGAATTAACAGACTCAACAGAACTGAACTTCAAAGCCATTGAAAGGGATGAGATGAGACTGAGAAGAATGTGCTCCATTGAAAGTTCTTTAACGTCTTCACAAAGCTCAGAGGAGGCCCCAACACTGAAGAAGAGAAAAGAAAAAGAAAAGGAAAAAAAACAGAGCAGCTCTGTTTCTGAGGGGGATTGTAAGAGATTAACGATGCAAAAAAGTGATGAAGATCAACAGGAATTCAGAATCGTCGACTTGAATGAAGCTCAATTTGATGATTCAGAAATTGGAACGCCATCACAGTTAATTGAGTATCTTTAA | 888 | 41.67 | MQNHQDMNLVLSTDAKPRLKWTPELHQRFVEAVNHLGGADKATPKSLMRVMGITGLTLYHLKSHLQKFRLGKSQQSETNAQLKLEEMQRKDGHLNGENSDGSQNHNTNDMKITEALEMQLEVQKRLHEQIEVQRHLQLRIEAQGKYLQRVLIKAQETITGYGCCSEALEEAKAELSQLASMVSSGCQSSSLSELTDSTELNFKAIERDEMRLRRMCSIESSLTSSQSSEEAPTLKKRKEKEKEKKQSSSVSEGDCKRLTMQKSDEDQQEFRIVDLNEAQFDDSEIGTPSQLIEYL | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 58553866 | 58555690 | - | Tan0015348.1 | Tan02g1465 | 744091 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1465 | 295 | ProSiteProfiles | Myb-type HTH DNA-binding domain profile. | 13 | 73 | IPR017930 | - | |
Tan02g1465 | 295 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 3 | 249 | IPR046955 | GO:0003700(InterPro) | |
Tan02g1465 | 295 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 16 | 71 | IPR006447 | GO:0003677(InterPro) | |
Tan02g1465 | 295 | Pfam | Myb-like DNA-binding domain | 18 | 68 | IPR001005 | - | |
Tan02g1465 | 295 | Gene3D | - | 15 | 73 | - | - | |
Tan02g1465 | 295 | MobiDBLite | consensus disorder prediction | 218 | 268 | - | - | |
Tan02g1465 | 295 | FunFam | Myb family transcription factor | 15 | 73 | - | - | |
Tan02g1465 | 295 | Pfam | MYB-CC type transfactor, LHEQLE motif | 110 | 157 | IPR025756 | - | |
Tan02g1465 | 295 | MobiDBLite | consensus disorder prediction | 231 | 268 | - | - | |
Tan02g1465 | 295 | SUPERFAMILY | Homeodomain-like | 15 | 71 | IPR009057 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1465 | Tan-Chr2:58553866 | Tan10g1521 | Tan-Chr10:23426252 | 5.40E-36 | dispersed | |
Tan09g0473 | Tan-Chr9:44324963 | Tan02g1465 | Tan-Chr2:58553866 | 2.60E-21 | transposed | |
Tan02g1465 | Tan-Chr2:58553866 | Tan04g1783 | Tan-Chr4:51402502 | 1.20E-11 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26753 | PF00249 | Myb_DNA-binding | 8.60E-07 | CL0123 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1465 | - | - | - | 0.0 |