Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1465 ATGCAGAATCATCAGGATATGAACTTAGTTTTGTCTACTGATGCAAAGCCAAGGCTGAAATGGACTCCTGAGCTTCATCAAAGATTTGTTGAAGCTGTCAATCACCTTGGTGGAGCTGATAAAGCCACACCTAAGAGCTTGATGAGAGTGATGGGAATCACTGGCCTCACTCTGTACCACCTCAAGAGCCATTTACAGAAATTCAGGTTGGGAAAAAGCCAACAGTCAGAAACCAATGCCCAACTCAAGCTGGAAGAGATGCAGAGAAAAGATGGGCATTTGAATGGGGAAAACAGCGATGGGAGTCAAAATCATAACACGAACGACATGAAGATAACCGAAGCACTGGAAATGCAATTGGAAGTGCAGAAGAGATTACATGAGCAAATAGAAGTACAAAGGCATTTACAGCTGAGAATCGAAGCACAAGGAAAGTATTTACAGAGAGTGTTAATAAAAGCACAAGAGACAATTACAGGGTACGGATGTTGTTCTGAAGCACTTGAAGAGGCCAAGGCCGAGCTCTCCCAATTGGCTTCAATGGTGAGCTCTGGATGCCAGAGTTCTTCATTGTCAGAATTAACAGACTCAACAGAACTGAACTTCAAAGCCATTGAAAGGGATGAGATGAGACTGAGAAGAATGTGCTCCATTGAAAGTTCTTTAACGTCTTCACAAAGCTCAGAGGAGGCCCCAACACTGAAGAAGAGAAAAGAAAAAGAAAAGGAAAAAAAACAGAGCAGCTCTGTTTCTGAGGGGGATTGTAAGAGATTAACGATGCAAAAAAGTGATGAAGATCAACAGGAATTCAGAATCGTCGACTTGAATGAAGCTCAATTTGATGATTCAGAAATTGGAACGCCATCACAGTTAATTGAGTATCTTTAA 888 41.67 MQNHQDMNLVLSTDAKPRLKWTPELHQRFVEAVNHLGGADKATPKSLMRVMGITGLTLYHLKSHLQKFRLGKSQQSETNAQLKLEEMQRKDGHLNGENSDGSQNHNTNDMKITEALEMQLEVQKRLHEQIEVQRHLQLRIEAQGKYLQRVLIKAQETITGYGCCSEALEEAKAELSQLASMVSSGCQSSSLSELTDSTELNFKAIERDEMRLRRMCSIESSLTSSQSSEEAPTLKKRKEKEKEKKQSSSVSEGDCKRLTMQKSDEDQQEFRIVDLNEAQFDDSEIGTPSQLIEYL 295
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 58553866 58555690 - Tan0015348.1 Tan02g1465 744091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1465 295 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 73 IPR017930 -
Tan02g1465 295 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 249 IPR046955 GO:0003700(InterPro)
Tan02g1465 295 NCBIfam myb-like DNA-binding domain, SHAQKYF class 16 71 IPR006447 GO:0003677(InterPro)
Tan02g1465 295 Pfam Myb-like DNA-binding domain 18 68 IPR001005 -
Tan02g1465 295 Gene3D - 15 73 - -
Tan02g1465 295 MobiDBLite consensus disorder prediction 218 268 - -
Tan02g1465 295 FunFam Myb family transcription factor 15 73 - -
Tan02g1465 295 Pfam MYB-CC type transfactor, LHEQLE motif 110 157 IPR025756 -
Tan02g1465 295 MobiDBLite consensus disorder prediction 231 268 - -
Tan02g1465 295 SUPERFAMILY Homeodomain-like 15 71 IPR009057 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1465 Tan-Chr2:58553866 Tan10g1521 Tan-Chr10:23426252 5.40E-36 dispersed
Tan09g0473 Tan-Chr9:44324963 Tan02g1465 Tan-Chr2:58553866 2.60E-21 transposed
Tan02g1465 Tan-Chr2:58553866 Tan04g1783 Tan-Chr4:51402502 1.20E-11 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26753 PF00249 Myb_DNA-binding 8.60E-07 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1465 - - - 0.0