Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1470 ATGGAGCATGGAGGCGTTGTGTCGAAGGGCATAGTGGAGGCAGATCTTTCAAATTCGTACAGAAAAATCATAATAGTTGCGGCAATTGCAGCTGGTATTCAATTTGGTTGGGCTCTCCAACTCTCATTGTTAACGCCTTACGTACAACAACTTGGGGTTCCACATACATGGTCAGCGTTCATATGGCTTTGTGGGCCAATGTCAGGGCTTATTGTGCAGCCGACTGTGGGGTATTACAGTGATCGTTGCACTTCTAGGTTTGGTCGTCGTCGACCCTTCATTGTTGCTGGGGCTGGCTTTGTGGCGGTTGCAGTTTTCCTCATTGGGTTCGCTGCAGATATTGGGCATTCAGCAGGAGATGAACTTTCAAAATCTACAAAACCAAGAGCTGTGGCAATATTTGTTGTTGGATTTTGGGTTCTTGATGTTGCTAACAACATGTTGCAAGGGCCTTGTAGAGCGTTGCTTGCAGATATGTCGTGTAACAACCACAAAAAAATGAGAGTGGCCAATGGTTTTTTCTCCTTCTTCATGGGGGTAGGGAATGTTATGGGGTATGCAGCTGGGTCCAATAACACACTCTATAAATTCCTTCCCTTTACAGTCACAAAAGCATGTGATGTTTATTGCGCCAACCTCAAAACATGCTTCTTAATCGACATTGTGTTACTCCTCGTGGTTACCACATTCGCAGTGCTAATGGTGAGTGAGAAGCCATTTGAGAACATCGACATTGACGGAGAATCAACCCCCTTTTTTGGCCAATTGTTTGGAGCACTTAAGCGGTTGTCAAAGCCGATGTGGCTCTTGCTACTTGTAACGGCTCTAAATTGGATTGGTTGGTTCCCATTTATAATGTACGACACTGACTGGATGGGTGCTGAAGTGTATGGTGGAAAGCCACAAGGGACTCCAGAACAAGAAAAGTTCTACGATCTCGGTGTTCGTGCTGGAGCCCTTGGATTGATGATAAATTCCTTTGTTCTTGGCTTTTCTGCTTTGGCGATAGAGCCTTTTAGCCGTATTGTGGGCGGCCTCAAGTGGGTTTGGGGAATTGTCAACATTATATTTGTAATTTGTATGGCATCTATTGTCGTCGTTACAAAGGTTGCTGAGCGTTGGAGGTCCACTCATGGCTTGGCTCTTCCTCCCCCCAATGTCAAGGCTGGAGCATTTTCCATCTTTGCAATCTTGGGTATTCCACTCTCGGTCACTTTTAGCGTTCCATTTGCCCTTGCATCCATCTTTTCTTCCACTTCCAATGCTGGTCAAGGTCTCTCTTTGGGAATTCTCAACCTCTTCATAGTCATTCCACAGTTTGTTGTCTCTGCAGTAAGTGGTCCGCTAGATGCAGCTTTTGGAGGAGGAAACTTACCCGCATTTGTATTGGGTGGTATTGCTGCTTTTGCAAGCGCAATCTGTGCCATGTTCCTACTCCCCGATCCACCGCCTCAACTTGAAGTTTCTTTATCAATGGCTGCCCATTGA 1488 45.83 MEHGGVVSKGIVEADLSNSYRKIIIVAAIAAGIQFGWALQLSLLTPYVQQLGVPHTWSAFIWLCGPMSGLIVQPTVGYYSDRCTSRFGRRRPFIVAGAGFVAVAVFLIGFAADIGHSAGDELSKSTKPRAVAIFVVGFWVLDVANNMLQGPCRALLADMSCNNHKKMRVANGFFSFFMGVGNVMGYAAGSNNTLYKFLPFTVTKACDVYCANLKTCFLIDIVLLLVVTTFAVLMVSEKPFENIDIDGESTPFFGQLFGALKRLSKPMWLLLLVTALNWIGWFPFIMYDTDWMGAEVYGGKPQGTPEQEKFYDLGVRAGALGLMINSFVLGFSALAIEPFSRIVGGLKWVWGIVNIIFVICMASIVVVTKVAERWRSTHGLALPPPNVKAGAFSIFAILGIPLSVTFSVPFALASIFSSTSNAGQGLSLGILNLFIVIPQFVVSAVSGPLDAAFGGGNLPAFVLGGIAAFASAICAMFLLPDPPPQLEVSLSMAAH 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 59008354 59009932 + Tan0000762.1 Tan02g1470 744096
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1470 495 Pfam MFS/sugar transport protein 29 279 - -
Tan02g1470 495 PANTHER SUGAR TRANSPORTER 16 478 - GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0008506(PANTHER)|GO:0016020(PANTHER)
Tan02g1470 495 FunFam Sucrose transporter SUC2 21 242 - -
Tan02g1470 495 SUPERFAMILY MFS general substrate transporter 21 483 IPR036259 -
Tan02g1470 495 NCBIfam sucrose/proton symporter 19 483 IPR005989 GO:0005886(InterPro)|GO:0008515(InterPro)|GO:0015770(InterPro)
Tan02g1470 495 Gene3D MFS general substrate transporter like domains 17 488 IPR036259 -
Tan02g1470 495 CDD MFS_SLC45_SUC 34 477 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g2895 Tan-Chr1:63089181 Tan02g1470 Tan-Chr2:59008354 1.70E-93 dispersed
Tan02g1470 Tan-Chr2:59008354 Tan02g2516 Tan-Chr2:93776094 9.80E-131 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1470 K15378 - csv:116401998 832.402