Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1505 ATGAGTTGCTTTTCTTGTATTAGTCCTCGCACTAAAGATGGGAGCAAGGTCGAAATTGATAATGGTGTTCGATTTGAATCTCGGCATTCTGTTAATTCCTCAGGTACGTGGAGGGGAAAAGAAGCTCGAAGCAACAGTGAAAGCTGTCCAAAGGGGAGCGCTGCCGCTCGTAGTTTCACGTTCCGCGAACTCGCCACAGCCACAAGAGGTTTCAAGGAAGTAAATTTGCTTGGAGAGGGTGGTTTTGGACGCGTCTACAAAGGACGTTTGGAAACAGGACAGATTGTTGCAGTTAAACAGCTTAATCGTGATGGACTTCAAGGCTTTCAGGAATTCATTGTGGAGGTTCTCATGTTGAGTCTGTTGCACCATCCAAATCTCGTCACCTTGATTGGTTACTGTACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCTATGGGAAGCCTGGAAGATCACCTTTTTGGTTTGAGTACTGACAAAGAACCACTGAGTTGGAACACGAGGATCAAGATTGCAGTTGGTGCTGCCCGAGGCCTCGAGTATCTCCACTGTAAAGCAAATCCCCCAGTAATATACCGGGACTTGAAATCAGCTAATATCTTATTGGACAATGGCTTTAATCCAAAGCTTTCAGATTTTGGACTAGCTAAATTGGGACCTGTTGGTGACAATACTCATGTTTCAACCAGAGTAATGGGAACATATGGATATTGTGCTCCAGAATATGCAATGAGTGGAAAATTAACCCTTAAATCTGATATTTACAGCTTTGGCGTGGTTCTACTTGAGCTTATTACGGGGCGTAAGGCAATTGATACTACGAGGAGACCAGGGGAGCAGAACCTAGTTGCTTGGTCCCGTCCTTTACTGAAGGACCGCAGAAAGTTCGTGCAATTAGTCGATCCCCTGCTGGAAGGACACTTCCCTCTTCGTTGTTTGCAACACGCAGTTGCAGTAACTGCAATGTGTCTTCAGGAACAACCATCATTTCGCCCTCTTATTAGTGATATTGTTGTAGCACTTGAATATTTGGCCTCTCAGAGTTATTTACAAGAACTACGCAATGCTAGGACCCACAGTTCATCACCACAATCATCACCTTCACAACAGAATGGAGGCACCAATGCCCAGGAATCAAATCCTTGA 1155 44.68 MSCFSCISPRTKDGSKVEIDNGVRFESRHSVNSSGTWRGKEARSNSESCPKGSAAARSFTFRELATATRGFKEVNLLGEGGFGRVYKGRLETGQIVAVKQLNRDGLQGFQEFIVEVLMLSLLHHPNLVTLIGYCTDGDQRLLVYEYMPMGSLEDHLFGLSTDKEPLSWNTRIKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNGFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAIDTTRRPGEQNLVAWSRPLLKDRRKFVQLVDPLLEGHFPLRCLQHAVAVTAMCLQEQPSFRPLISDIVVALEYLASQSYLQELRNARTHSSSPQSSPSQQNGGTNAQESNP 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 64392830 64397711 + Tan0007701.3 Tan02g1505 744131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1505 384 FunFam probable serine/threonine-protein kinase RLCKVII 42 146 - -
Tan02g1505 384 ProSiteProfiles Protein kinase domain profile. 71 347 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1505 384 Gene3D Phosphorylase Kinase; domain 1 42 146 - -
Tan02g1505 384 MobiDBLite consensus disorder prediction 29 52 - -
Tan02g1505 384 PANTHER OS07G0668900 PROTEIN 41 369 - -
Tan02g1505 384 Pfam Protein kinase domain 72 340 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1505 384 SUPERFAMILY Protein kinase-like (PK-like) 50 345 IPR011009 -
Tan02g1505 384 Gene3D Transferase(Phosphotransferase) domain 1 147 367 - -
Tan02g1505 384 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g1505 384 MobiDBLite consensus disorder prediction 358 384 - -
Tan02g1505 384 SMART serkin_6 71 347 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1505 384 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524(InterPro)
Tan02g1505 384 CDD STKc_IRAK 77 345 - -
Tan02g1505 384 FunFam Serine/threonine-protein kinase PBS1 147 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1503 Tan-Chr2:64392830 Tan02g1505 Tan-Chr2:64392830 7.10E-222 dispersed
Tan02g1505 Tan-Chr2:64392830 Tan02g1508 Tan-Chr2:64392830 7.10E-222 dispersed
Tan02g1504 Tan-Chr2:64392830 Tan02g1505 Tan-Chr2:64392830 7.10E-222 tandem
Tan02g1505 Tan-Chr2:64392830 Tan02g1506 Tan-Chr2:64392830 2.90E-167 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67217 PF00069 Pkinase 9.20E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1505 - - - 0.0