Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1510 | ATGAGTTGCTTTTCTTGTATTAGTCCTCGCACTAAAGATGGGAGCAAGGTCGAAATTGATAATGGTGTTCGATTTGAATCTCGGCATTCTGTTAATTCCTCAGGTACGTGGAGGGGAAAAGAAGCTCGAAGCAACAGTGAAAGCTGTCCAAAGGGGAGCGCTGCCGCTCGTAGTTTCACGTTCCGCGAACTCGCCACAGCCACAAGAGGTTTCAAGGAAGTAAATTTGCTTGGAGAGGGTGGTTTTGGACGCGTCTACAAAGGACGTTTGGAAACAGGACAGATTGTTGCAGTTAAACAGCTTAATCGTGATGGACTTCAAGGCTTTCAGGAATTCATTGTGGAGGTTCTCATGTTGAGTCTGTTGCACCATCCAAATCTCGTCACCTTGATTGGTTACTGTACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCTATGGGAAGCCTGGAAGATCACCTTTTTGGTTTGAGTACTGACAAAGAACCACTGAGTTGGAACACGAGGATCAAGATTGCAGTTGGTGCTGCCCGAGGCCTCGAGTATCTCCACTGTAAAGCAAATCCCCCAGTAATATACCGGGACTTGAAATCAGCTAATATCTTATTGGACAATGGCTTTAATCCAAAGCTTTCAGATTTTGGACTAGCTAAATTGGGACCTGTTGGTGACAATACTCATGTTTCAACCAGAGTAATGGGAACATATGGATATTGTGCTCCAGAATATGCAATGAGTGGAAAATTAACCCTTAAATCTGATATTTACAGCTTTGGCGTGGTTCTACTTGAGCTTATTACGGGGCGTAAGGCAATTGATACTACGAGGAGACCAGGGGAGCAGAACCTAGTTGCTTGGGTTAGTAATTTATAA | 879 | 43.91 | MSCFSCISPRTKDGSKVEIDNGVRFESRHSVNSSGTWRGKEARSNSESCPKGSAAARSFTFRELATATRGFKEVNLLGEGGFGRVYKGRLETGQIVAVKQLNRDGLQGFQEFIVEVLMLSLLHHPNLVTLIGYCTDGDQRLLVYEYMPMGSLEDHLFGLSTDKEPLSWNTRIKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNGFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAIDTTRRPGEQNLVAWVSNL | 292 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 64392830 | 64397711 | + | Tan0007701.8 | Tan02g1510 | 744136 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1510 | 292 | FunFam | probable serine/threonine-protein kinase RLCKVII | 42 | 146 | - | - | |
Tan02g1510 | 292 | Gene3D | Phosphorylase Kinase; domain 1 | 42 | 146 | - | - | |
Tan02g1510 | 292 | FunFam | Serine/threonine-protein kinase PBS1 | 147 | 292 | - | - | |
Tan02g1510 | 292 | CDD | STKc_IRAK | 77 | 289 | - | - | |
Tan02g1510 | 292 | MobiDBLite | consensus disorder prediction | 29 | 52 | - | - | |
Tan02g1510 | 292 | SMART | serkin_6 | 71 | 289 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan02g1510 | 292 | ProSiteProfiles | Protein kinase domain profile. | 71 | 292 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan02g1510 | 292 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 193 | 205 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Tan02g1510 | 292 | PANTHER | OS07G0668900 PROTEIN | 41 | 290 | - | - | |
Tan02g1510 | 292 | Pfam | Protein kinase domain | 72 | 275 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Tan02g1510 | 292 | Gene3D | Transferase(Phosphotransferase) domain 1 | 147 | 292 | - | - | |
Tan02g1510 | 292 | ProSitePatterns | Protein kinases ATP-binding region signature. | 77 | 99 | IPR017441 | GO:0005524(InterPro) | |
Tan02g1510 | 292 | SUPERFAMILY | Protein kinase-like (PK-like) | 50 | 278 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1508 | Tan-Chr2:64392830 | Tan02g1510 | Tan-Chr2:64392830 | 2.90E-167 | dispersed | |
Tan02g1510 | Tan-Chr2:64392830 | Tan10g0966 | Tan-Chr10:8421793 | 3.20E-113 | dispersed | |
Tan02g1509 | Tan-Chr2:64392830 | Tan02g1510 | Tan-Chr2:64392830 | 1.10E-169 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
67222 | PF00069 | Pkinase | 2.60E-46 | CL0016 | Tan | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1510 | - | - | - | 0.0 |