Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1510 ATGAGTTGCTTTTCTTGTATTAGTCCTCGCACTAAAGATGGGAGCAAGGTCGAAATTGATAATGGTGTTCGATTTGAATCTCGGCATTCTGTTAATTCCTCAGGTACGTGGAGGGGAAAAGAAGCTCGAAGCAACAGTGAAAGCTGTCCAAAGGGGAGCGCTGCCGCTCGTAGTTTCACGTTCCGCGAACTCGCCACAGCCACAAGAGGTTTCAAGGAAGTAAATTTGCTTGGAGAGGGTGGTTTTGGACGCGTCTACAAAGGACGTTTGGAAACAGGACAGATTGTTGCAGTTAAACAGCTTAATCGTGATGGACTTCAAGGCTTTCAGGAATTCATTGTGGAGGTTCTCATGTTGAGTCTGTTGCACCATCCAAATCTCGTCACCTTGATTGGTTACTGTACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCTATGGGAAGCCTGGAAGATCACCTTTTTGGTTTGAGTACTGACAAAGAACCACTGAGTTGGAACACGAGGATCAAGATTGCAGTTGGTGCTGCCCGAGGCCTCGAGTATCTCCACTGTAAAGCAAATCCCCCAGTAATATACCGGGACTTGAAATCAGCTAATATCTTATTGGACAATGGCTTTAATCCAAAGCTTTCAGATTTTGGACTAGCTAAATTGGGACCTGTTGGTGACAATACTCATGTTTCAACCAGAGTAATGGGAACATATGGATATTGTGCTCCAGAATATGCAATGAGTGGAAAATTAACCCTTAAATCTGATATTTACAGCTTTGGCGTGGTTCTACTTGAGCTTATTACGGGGCGTAAGGCAATTGATACTACGAGGAGACCAGGGGAGCAGAACCTAGTTGCTTGGGTTAGTAATTTATAA 879 43.91 MSCFSCISPRTKDGSKVEIDNGVRFESRHSVNSSGTWRGKEARSNSESCPKGSAAARSFTFRELATATRGFKEVNLLGEGGFGRVYKGRLETGQIVAVKQLNRDGLQGFQEFIVEVLMLSLLHHPNLVTLIGYCTDGDQRLLVYEYMPMGSLEDHLFGLSTDKEPLSWNTRIKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNGFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAIDTTRRPGEQNLVAWVSNL 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 64392830 64397711 + Tan0007701.8 Tan02g1510 744136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1510 292 FunFam probable serine/threonine-protein kinase RLCKVII 42 146 - -
Tan02g1510 292 Gene3D Phosphorylase Kinase; domain 1 42 146 - -
Tan02g1510 292 FunFam Serine/threonine-protein kinase PBS1 147 292 - -
Tan02g1510 292 CDD STKc_IRAK 77 289 - -
Tan02g1510 292 MobiDBLite consensus disorder prediction 29 52 - -
Tan02g1510 292 SMART serkin_6 71 289 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1510 292 ProSiteProfiles Protein kinase domain profile. 71 292 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1510 292 ProSitePatterns Serine/Threonine protein kinases active-site signature. 193 205 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g1510 292 PANTHER OS07G0668900 PROTEIN 41 290 - -
Tan02g1510 292 Pfam Protein kinase domain 72 275 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1510 292 Gene3D Transferase(Phosphotransferase) domain 1 147 292 - -
Tan02g1510 292 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524(InterPro)
Tan02g1510 292 SUPERFAMILY Protein kinase-like (PK-like) 50 278 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1508 Tan-Chr2:64392830 Tan02g1510 Tan-Chr2:64392830 2.90E-167 dispersed
Tan02g1510 Tan-Chr2:64392830 Tan10g0966 Tan-Chr10:8421793 3.20E-113 dispersed
Tan02g1509 Tan-Chr2:64392830 Tan02g1510 Tan-Chr2:64392830 1.10E-169 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67222 PF00069 Pkinase 2.60E-46 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1510 - - - 0.0