Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1612 ATGGAGGAAATGTCCCCAGCGGTTGTGGTGCCATTTAGGGTAGGTAATTCAGTCTGTGATAACCCCAACATGGCAACTCCCATGGATATCACAAGACTTAAGCTAATGGCAGATACTGCTGGTTTGTTGTCTGATTCTGTGACTAAGGCTTCTGACGACCCGACTGAAGTAGGTTCTGATGATTGTAAGAGTTCTAATGGGGAGGAAGAGGTTAGTATTACTACAGTTTCGGTTATGAATGATGACAAGTGTGAAGGAGTTCCGTTGTCGGTCGTGTTGTCTCAAAATAATTGCAATTGGGTTGCGGCGGATGAGACGATATCCCATGGAAGTGAGGAAGATGATTCTTTATCTTTAGAGGGTGATCACATTTATGACAGCTCTTGTTCGCATTCAGTGATTAGTGAGACTAGCAGCATTTGTGGTGATGATTTTTTAGGTTCTGAGGTGTCTTCTTTTGAAGCATTTGGTTCCATCAGCAATTCCAAGGATGTTAGCAGTGTCGTGAATGCAGCTACAGCCAATCTTGGAGAGTCTAATGTTGAAAGTCTTGAAACTCAGATTGCGAGTTCTTCTTCTGTAGCAGTTAGCCTTGAAGAGGATGTTGGAGAAGGGTCAGGCATTGAAGCATGTAACATTGTTCTTCAGCTTCCTCTTGAGAGAAGGGCAAGCGAACCAGTCAGTCGAAGTGTTTTTGAGGTAGATTGTGTTCCCCTTTGGGGATTTACGTCTGTATGTGGAAGAAGACCCGAGATGGAAGATGCAGTGCAAACTGTACCTAGGTTTTCAGAACTTCCTATCCAAATGCTTATTGGTGACCGAGTTCTTGATGGCTCAAGCAAGGCCATAGCTCACCAAACTGTTCATTTTTTTGGAGTTTATGATGGTCATGGTGGCTCTCAGGTTGCAAATTTTTGTCGTGAACGCATGCACTTGGCTCTATCTGAGGAGATAGAACTTGCTAAGCAAGATATAGCTGCTGGCCATATGAAGGATAATTGTCAAGAGCTATGGAGAAAGGCATTCACCAAATGTTTTCTAAAAGTTGATGCTGAACTTGGAGGGAGACCTGGTGTTGAGCCTGTTGCACCAGAAACTGTAGGCTCCACAGCTGTTGTTGCAATTTTCTGTGCCTCTCACATTATTGTTGCGAACTGTGGAGACTCAAGAGCAGTTCTCTGTCGTGGGAAGGAGCCGATGGCATTGTCCGTGGATCACAAACCAAACAGAGAAGATGAATATGAAAGAATTGAAGCTGCAGGAGGAAAGGTCATACAGTGGAATGGGCACCGTGTTTTTGGTGTTCTTGCAATGTCGAGATCCATCGGTGATAGATACTTGAAACCGTGGATCATCCCGGAGCCGGAAGTGATGTTCCTCCCTCGAGCAAAAGACGACGAATGCCTCATTCTAGCCAGTGATGGTTTGTGGGATGTGATGACGAATGAAGAGGTATGCGACCTGGCTAGGAGACGAATCCTACTCTGGCACAAGAAGAATGGCACCCCTTCGCCTTCTGAGAGGGGTGTGGGGATCGATCCCGCAGCCCAAGCAGCCGCAGAATACCTCTCGAACCGAGCTCTTCAGAAGGGCAGCAAAGACAACATAACAGTAATCGTGATTGATTTGAAAGCTCAAAGGAAGTTCAAGACCAAATCATAA 1662 45.49 MEEMSPAVVVPFRVGNSVCDNPNMATPMDITRLKLMADTAGLLSDSVTKASDDPTEVGSDDCKSSNGEEEVSITTVSVMNDDKCEGVPLSVVLSQNNCNWVAADETISHGSEEDDSLSLEGDHIYDSSCSHSVISETSSICGDDFLGSEVSSFEAFGSISNSKDVSSVVNAATANLGESNVESLETQIASSSSVAVSLEEDVGEGSGIEACNIVLQLPLERRASEPVSRSVFEVDCVPLWGFTSVCGRRPEMEDAVQTVPRFSELPIQMLIGDRVLDGSSKAIAHQTVHFFGVYDGHGGSQVANFCRERMHLALSEEIELAKQDIAAGHMKDNCQELWRKAFTKCFLKVDAELGGRPGVEPVAPETVGSTAVVAIFCASHIIVANCGDSRAVLCRGKEPMALSVDHKPNREDEYERIEAAGGKVIQWNGHRVFGVLAMSRSIGDRYLKPWIIPEPEVMFLPRAKDDECLILASDGLWDVMTNEEVCDLARRRILLWHKKNGTPSPSERGVGIDPAAQAAAEYLSNRALQKGSKDNITVIVIDLKAQRKFKTKS 553
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 74820624 74825706 - Tan0020615.1 Tan02g1612 744238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1612 553 Gene3D - 226 553 IPR036457 -
Tan02g1612 553 PANTHER PROTEIN PHOSPHATASE 193 542 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0009788(PANTHER)|GO:0035970(PANTHER)
Tan02g1612 553 MobiDBLite consensus disorder prediction 46 68 - -
Tan02g1612 553 FunFam Protein phosphatase 2C 16 227 553 - -
Tan02g1612 553 SUPERFAMILY PP2C-like 234 544 IPR036457 -
Tan02g1612 553 CDD PP2Cc 241 543 IPR001932 -
Tan02g1612 553 Pfam Protein phosphatase 2C 267 536 IPR001932 -
Tan02g1612 553 ProSitePatterns PPM-type phosphatase domain signature. 290 298 IPR000222 GO:0043169(InterPro)
Tan02g1612 553 ProSiteProfiles PPM-type phosphatase domain profile. 239 543 IPR001932 -
Tan02g1612 553 SMART PP2C_4 229 541 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1612 Tan-Chr2:74820624 Tan02g1614 Tan-Chr2:74820624 0.00E+00 dispersed
Tan02g1612 Tan-Chr2:74820624 Tan02g1613 Tan-Chr2:74820624 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1612 K14497 - csv:101207918 996.882