Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1616 ATGTCTCCCTCCTCGTATTCACCTGAAGATGGGATTCCCTTGAACACCACCGCGGTTGCCATTGACAAGGATAAGAACAGCCAACACGCCGTCCGTTGGGCGATCGATCATCTTGTCATAAGCAACCCGCTTATCATTCTCATCCATGTTAGGCATAAAGCTAATCAACATCAGGGCGCTAGCGATTCTGAAAATGGCGAAACTGATGCGCAGCAGCTGTTTGTTCCCTTCCGTGGATTTTGTGCGCGTAAAGGGGTTCAGCTGAAGGAGGTTGTTCTTGACGATACTGATATTCCCAAAGCACTTGTTGACTACGTTCACAAGAATTGCATCAACAATTTTGTAGTTGGAGCTTCAACAAGGAGTGCCCTAGCAAGGAAATTTAAAGGTCCTGATGTTCCAACCAGCGTAATAAAAACTGCCCCGGACTTTTGTTCTGTGTATGTAATATCAAAAGGGAAGATAATATCTGCCAGGGCAGCTCTTCGGCCAGTGGCTAATACTGCCATGCCACCAAGACAACCATCACCGCTTGGAATTCAGCCAAATGTTCAACATGACAGCAGCAATGAACAAGAAAATGGAGCCAAAGGGCAACCAGCAAGGGAAGGATGGAAAAGTGCAGGTTCAGAGAGAATGCTCTGTGAAAGGAATGGTGCAAAACCGGCAAAAGCGTTGACTCGTGAGAGGCCAAAAACTTCTCCGACTAATATATCATTGGAAAATATTGAGGTTCCAAATCGAGGGTCTAGATCTTCATTTAGCCATGATTCGATCTCTGACGACAATATGTTGACTGCCCAGATGGCTTTTGGTTCAATGGATGTGAGTGGTCATAATTTAGATTTCAGTATTAGCTCCAATTTGTCAATGGACTCTGCTTCTGCACAATCGACTCGAGAACTAGAGGCTGAGATGAAAAGATTGAAGCTGGAATTAAAGCAAACCATGGATATGTATAGCTCAGCCTGCAAAGAGGCAATCTCAGCCAAGAACAAGGCTAGAGAACTTAGTCAGTGGAAGCAAGATGAGGCACGTAAGTTTGAGGAAGTCAGACTAGCTGAAGAGGCTGCTCTCGCTATTGCTGAGATGGAGAAAGCCAAGTGCAAAGCTGCGATTGAAGCAGCGGAGGCAGCACAAAAGCTAGCCGAAAGAGAAGCCCAGAGAAGAAAACAGGCTGAATTGAAGGCCAGAAAAGAGGCAGAAGAGAAAAAACGAGCATTGAGTGCTCTAGCTCATAATGATGTCCGATATAGAAAATACACCATAGAGGAGATAGAGGAATCTACTGAAAAGTTCTCTGAAAAATTGAAGATCGGAGAAGGTGGATACGGTCCTGTTTATGGAGGCAAACTTGATCATACGGCTGTTGCGATTAAAGTTTTAAGACCGGACGCTGCTCAAGGACGGAAGCAATTTCAACAAGAGGTGGAGGTCCTCTGTTGTATTAGACATCCAAACATGGTTCTCCTTCTTGGGGCATGCCCCGAGTATGGTTGTTTGGTATACGAATACATGCATAATGGGAGCTTAGAAGACAGACTTTTCCGGAGAGGGAATACTCCTCCATTATCTTGGAGACGACGATTCAAAATATCTGCTGAAATTGCAACCGCACTCCTTTTTCTTCACCAAGCAAAGCCAGAACCGCTTGTGCATAGGGACCTTAAACCAGCTAACATTCTCTTGGACCGCAATTTTGTGAGCAAAATCAGTGACGTTGGCCTGGCCCGGCTAGTCCCGCCTTCTGTAGCCGATCAAGTCACTCAATATCACCTGACTTCAGCAGCTGGCACATTTTGTTACATTGATCCCGAGTACCAACAAACAGGAAAGTTAACAACAAAATCTGATATTTATTCGTTTGGAATAATGTTACTTCAAATTATTACTGCCAAGCCTCCAATGGGTCTGGCTCACCATGTGCAAAGGGCCATTGAGAAAGAGAGGTTCGATGAGATGCTGGATCCTACAATTTCAGATTGTCCATTAGAGGAGGCTATAAATTTTGCAAAACTGGCATTGAAGTGCGCTGAACTGAGGAAGAGAGACAGACCAGATCTTGGAACACTTATCGTTCCGGAGCTCAACAGGTTAAGAGATATTGGGAGGAGTTCTGACAAACGTGAGGGTCGGAATCACTTTCCACGCTCTGCCGCATCAAGTTCCAGTTCGAGGCCGCAGTCATCAAATGAGCTTAAGTGGACTGATTCTGTTGAGAGGTTTGTGAATTACATATCATTGTCCCAAGGAATTTCCAGGAAGGAATTGAGGAGCCCAGGTTGGGAAGAAAAGGATAAAGCAAGCATGAACAAAAGGATTAAAGTGCAGGAATTACATAAAGCTTCCTCCTTTCTGCAACTCAACATAACTTCATCCATGGAACATTTCACCAAAACCTTCCATTTCTCTTCCCTCTTCATTCTTCTGATCTTCCACCTCACCGGCGCTGCCACGGCGTCCGACGACCACCATCTGGTCGAGGTGGTGCCTCCGGTTAGCCTTCTCTGTATCAGCGAATGCTCAACTTGCCCCGTCATATGCGCACCCCCGCCACCGCCCACGGCGGCGCTCAAGTCTCCTCCGCCTGTTCCCCATTCACCGCCGATGGCTTACTTCCCACTCAACTCACCCCCATCCCCATCCCCACCCCGACCGACCCCATCACCACCGCCGGCGGCGGCTTCATCTCATCCCCCGCCGCCTCCCGCTTTCAAATACTATTTCAGCTTGCCGCCTCCGCCGCCGGTGCTGATTCCGGTACCTGTGCCACCGACGACGGCGGCGCCTCATGGAAATACCAATGCTTATAATTACTACTTCTACGCTTCGAAGTCGTCTTCTCTGTCTCTTCCGGCGGTGGCTTTTTGGGCTCTGTTTCTCTTCCATTTGGTGTTGTCTTGTTGGTGA 2910 47.29 MSPSSYSPEDGIPLNTTAVAIDKDKNSQHAVRWAIDHLVISNPLIILIHVRHKANQHQGASDSENGETDAQQLFVPFRGFCARKGVQLKEVVLDDTDIPKALVDYVHKNCINNFVVGASTRSALARKFKGPDVPTSVIKTAPDFCSVYVISKGKIISARAALRPVANTAMPPRQPSPLGIQPNVQHDSSNEQENGAKGQPAREGWKSAGSERMLCERNGAKPAKALTRERPKTSPTNISLENIEVPNRGSRSSFSHDSISDDNMLTAQMAFGSMDVSGHNLDFSISSNLSMDSASAQSTRELEAEMKRLKLELKQTMDMYSSACKEAISAKNKARELSQWKQDEARKFEEVRLAEEAALAIAEMEKAKCKAAIEAAEAAQKLAEREAQRRKQAELKARKEAEEKKRALSALAHNDVRYRKYTIEEIEESTEKFSEKLKIGEGGYGPVYGGKLDHTAVAIKVLRPDAAQGRKQFQQEVEVLCCIRHPNMVLLLGACPEYGCLVYEYMHNGSLEDRLFRRGNTPPLSWRRRFKISAEIATALLFLHQAKPEPLVHRDLKPANILLDRNFVSKISDVGLARLVPPSVADQVTQYHLTSAAGTFCYIDPEYQQTGKLTTKSDIYSFGIMLLQIITAKPPMGLAHHVQRAIEKERFDEMLDPTISDCPLEEAINFAKLALKCAELRKRDRPDLGTLIVPELNRLRDIGRSSDKREGRNHFPRSAASSSSSRPQSSNELKWTDSVERFVNYISLSQGISRKELRSPGWEEKDKASMNKRIKVQELHKASSFLQLNITSSMEHFTKTFHFSSLFILLIFHLTGAATASDDHHLVEVVPPVSLLCISECSTCPVICAPPPPPTAALKSPPPVPHSPPMAYFPLNSPPSPSPPRPTPSPPPAAASSHPPPPPAFKYYFSLPPPPPVLIPVPVPPTTAAPHGNTNAYNYYFYASKSSSLSLPAVAFWALFLFHLVLSCW 969
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 75153125 75159712 + Tan0001761.1 Tan02g1616 744242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1616 969 MobiDBLite consensus disorder prediction 168 241 - -
Tan02g1616 969 SUPERFAMILY Protein kinase-like (PK-like) 416 691 IPR011009 -
Tan02g1616 969 CDD STKc_IRAK 439 699 - -
Tan02g1616 969 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 405 505 - -
Tan02g1616 969 MobiDBLite consensus disorder prediction 179 196 - -
Tan02g1616 969 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 17 150 - -
Tan02g1616 969 PANTHER OS02G0152300 PROTEIN 18 715 IPR051348 -
Tan02g1616 969 MobiDBLite consensus disorder prediction 875 898 - -
Tan02g1616 969 Pfam Protein tyrosine and serine/threonine kinase 437 691 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g1616 969 Coils Coil 359 411 - -
Tan02g1616 969 ProSiteProfiles Protein kinase domain profile. 433 696 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1616 969 Gene3D Phosphorylase Kinase; domain 1 395 505 - -
Tan02g1616 969 SMART serkin_6 433 696 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1616 969 MobiDBLite consensus disorder prediction 703 732 - -
Tan02g1616 969 MobiDBLite consensus disorder prediction 716 732 - -
Tan02g1616 969 CDD STK_N 16 153 - -
Tan02g1616 969 Gene3D HUPs 14 152 IPR014729 -
Tan02g1616 969 PRINTS Proline rich extensin signature 912 929 - -
Tan02g1616 969 PRINTS Proline rich extensin signature 863 884 - -
Tan02g1616 969 PRINTS Proline rich extensin signature 886 902 - -
Tan02g1616 969 PRINTS Proline rich extensin signature 851 863 - -
Tan02g1616 969 Gene3D Transferase(Phosphotransferase) domain 1 506 716 - -
Tan02g1616 969 ProSitePatterns Serine/Threonine protein kinases active-site signature. 551 563 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g1616 969 Coils Coil 299 319 - -
Tan02g1616 969 Pfam Universal stress protein family 19 149 IPR006016 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1616 Tan-Chr2:75153125 Tan02g2609 Tan-Chr2:94674540 1.80E-200 dispersed
Tan02g1616 Tan-Chr2:75153125 Tan06g0151 Tan-Chr6:1435251 5.70E-191 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67227 PF07714 PK_Tyr_Ser-Thr 4.10E-41 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1616 - - - 0.0