Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1638 ATGTTGAAGGTATCCTCCTCATCTCACTGCATTTCCATCTTCATCTTTCTCCTTTTCCTCTGCTCTACGCGGTCACTTCCTTCCTCCGCTGTCACCCTTTCCGACTCGGATCACCCGGTTCTCGCTAACGCCACTCTCCAGTCCAACAACGTATCCAGTCCAAGGAATAAGGAGGGTAGTTTTGCTGACATCATTGATCGTGCTCTGGAGAATGAGTTCAAGGAGAATGACCAGAATGAAGCAATTGATGCAGGAAGCTTCAACAACAGCGTAGCAGAGCAGCAGGCAGTTCTGGAGACTGTAGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAGTGATAATAGAGCTGAAGATACTCCTACATTGATTGATCGAAGGGACAATGTCTTTATCATATCTAACTTCAAATCTAAATATCCAGTGCTGCAGCTAGACTTGAGATTGATCTCAGATTTGGTTATCGTTATTGTCTCTGCAACTTGTGGCGGCATTGCCTTTGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCGGGAGGATTTAACTTTGTCAGTGAAATGGTGCAAGTTGAAACGGTAGCCCAATTTGGTGTAATTTTTCTTCTTTTTGCACTGGGGCTGGAGTTTTCAACAACTAAGCTTCGAGTTGTTCGTGCAGTTGCTGTTCTTGGTGGCCTGCTCCAAATTTTCCTATTTATGTGCCTCAGTGGGATCACAGCCTCATCATGTGGTGGGAGTGCTTCTGAAGGTGTTTTTGTTGGAGCATTCCTATCAATGTCCTCAACAGCTGTGGTGCTGAAGTTTTTGATGGAAAAGAATTCGGCAAATGCTCTTCATGGACAAGTCACGATCGGCACCCTTATCTTGCAGGACTGTGCTGTTGGGTTACTGTTTGCTTTGCTTCCAGTACTGGGTGGGAATTCTGGTATTCTTCAAGGAGTGATGTCAATGAGTAAAGTGTTGGTGATCTTGGTTACTTTTCTGGTTGTTTTGTCAATTCTATCACGTACATGTGTTCCTTGGCTTTTAAAGTTGATGATAAGTCTATCATCACAGACCAACGAACTATATCAATTAGCCTCAGTGGCATTCTGCTTGCTTGTAGCGTGGTGTAGTGATAAGTTAGGGCTAAGTCTAGAATTGGGCTCCTTTGCTGCTGGAGTGATGATATCGACAACTGATCTTGCTCAACATACACTCGAACAAATAGAGCCTATAAGGAACTTCTTTGCGGCCCTCTTTCTTGCCAGCATTGGAATGCTGATCCACGTTCAGTTTTTATGGAACCATGTTGATATATTACTTGCAGCTGTTATACTGGTGATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAGGGATTTGGATATAACAACAGGACATCACTTCTGGTTGGAATGTCTCTGGCTCAAATAGGAGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTCCATCTAGTAGAGGGAAAACTGTATCTGTTGCTTATTGGGACCACAGCTCTCAGTCTGGTAACAACTCCTCTTCTTTTCAAGCTGATACCTGCTGTAGTGCATTTAGGCGTGCTATTGCGGTGGTTCTCTCCAGACAGTCTCGTTGAGATTGGATTTAAAGGAGACATCATCCGCTCAGACAGTGTAAAGCAGCGTGTTATGTTGATGGTCCAGGGACCTCATGATTCATGA 1758 43.29 MLKVSSSSHCISIFIFLLFLCSTRSLPSSAVTLSDSDHPVLANATLQSNNVSSPRNKEGSFADIIDRALENEFKENDQNEAIDAGSFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDSDNRAEDTPTLIDRRDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLSGITASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSANALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVMSMSKVLVILVTFLVVLSILSRTCVPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNFFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSLVEIGFKGDIIRSDSVKQRVMLMVQGPHDS 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 76711752 76736459 + Tan0019192.1 Tan02g1638 744264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1638 585 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 34 568 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Tan02g1638 585 Pfam Sodium/hydrogen exchanger family 170 536 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Tan02g1638 585 Gene3D - 160 543 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1638 Tan-Chr2:76711752 Tan02g1640 Tan-Chr2:76711752 2.80E-294 dispersed
Tan02g1638 Tan-Chr2:76711752 Tan02g1639 Tan-Chr2:76711752 1.30E-288 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1638 K26735 - csv:101217282 1010.36