Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1639 ATGTTGAAGTCCAACAACGTATCCAGTCCAAGGAATAAGGAGGGTAGTTTTGCTGACATCATTGATCGTGCTCTGGAGAATGAGTTCAAGGAGAATGACCAGAATGAAGCAATTGATGCAGGAAGCTTCAACAACAGCGTAGCAGAGCAGCAGGCAGTTCTGGAGACTGTAGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAGTGATAATAGAGCTGAAGATACTCCTACATTGATTGATCGAAGGGACAATGTCTTTATCATATCTAACTTCAAATCTAAATATCCAGTGCTGCAGCTAGACTTGAGATTGATCTCAGATTTGGTTATCGTTATTGTCTCTGCAACTTGTGGCGGCATTGCCTTTGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCGGGAGGATTTAACTTTGTCAGTGAAATGGTGCAAGTTGAAACGGTAGCCCAATTTGGTGTAATTTTTCTTCTTTTTGCACTGGGGCTGGAGTTTTCAACAACTAAGCTTCGAGTTGTTCGTGCAGTTGCTGTTCTTGGTGGCCTGCTCCAAATTTTCCTATTTATGTGCCTCAGTGGGATCACAGCCTCATCATGTGGTGGGAGTGCTTCTGAAGGTGTTTTTGTTGGAGCATTCCTATCAATGTCCTCAACAGCTGTGGTGCTGAAGTTTTTGATGGAAAAGAATTCGGCAAATGCTCTTCATGGACAAGTCACGATCGGCACCCTTATCTTGCAGGACTGTGCTGTTGGGTTACTGTTTGCTTTGCTTCCAGTACTGGGTGGGAATTCTGGTATTCTTCAAGGAGTGATGTCAATGAGTAAAGTGTTGGTGATCTTGGTTACTTTTCTGGTTGTTTTGTCAATTCTATCACGTACATGTGTTCCTTGGCTTTTAAAGTTGATGATAAGTCTATCATCACAGACCAACGAACTATATCAATTAGCCTCAGTGGCATTCTGCTTGCTTGTAGCGTGGTGTAGTGATAAGTTAGGGCTAAGTCTAGAATTGGGCTCCTTTGCTGCTGGAGTGATGATATCGACAACTGATCTTGCTCAACATACACTCGAACAAATAGAGCCTATAAGGAACTTCTTTGCGGCCCTCTTTCTTGCCAGCATTGGAATGCTGATCCACGTTCAGTTTTTATGGAACCATGTTGATATATTACTTGCAGCTGTTATACTGGTGATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAGGGATTTGGATATAACAACAGGACATCACTTCTGGTTGGAATGTCTCTGGCTCAAATAGGAGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTCCATCTAGTAGAGGGAAAACTGTATCTGTTGCTTATTGGGACCACAGCTCTCAGTCTGGTAACAACTCCTCTTCTTTTCAAGCTGATACCTGCTGTAGTGCATTTAGGCGTGCTATTGCGGTGGTTCTCTCCAGACAGTCTCGTTGAGATTGGATTTAAAGGAGACATCATCCGCTCAGACAGTGTAAAGCAGCGTGTTATGTTGATGGTCCAGGGACCTCATGATTCATGA 1626 42.44 MLKSNNVSSPRNKEGSFADIIDRALENEFKENDQNEAIDAGSFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDSDNRAEDTPTLIDRRDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKLRVVRAVAVLGGLLQIFLFMCLSGITASSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSANALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVMSMSKVLVILVTFLVVLSILSRTCVPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNFFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSLVEIGFKGDIIRSDSVKQRVMLMVQGPHDS 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 76711752 76736459 + Tan0019192.2 Tan02g1639 744265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1639 541 Gene3D - 116 499 IPR038770 -
Tan02g1639 541 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 4 524 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
Tan02g1639 541 Pfam Sodium/hydrogen exchanger family 126 492 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1639 Tan-Chr2:76711752 Tan09g1155 Tan-Chr9:63907897 1.00E-245 dispersed
Tan02g1638 Tan-Chr2:76711752 Tan02g1639 Tan-Chr2:76711752 1.30E-288 tandem
Tan02g1639 Tan-Chr2:76711752 Tan02g1640 Tan-Chr2:76711752 9.90E-270 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1639 K26735 - csv:101217282 969.148