Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1640 ATGTTGAAGGTATCCTCCTCATCTCACTGCATTTCCATCTTCATCTTTCTCCTTTTCCTCTGCTCTACGCGGTCACTTCCTTCCTCCGCTGTCACCCTTTCCGACTCGGATCACCCGGTTCTCGCTAACGCCACTCTCCAGTCCAACAACGTATCCAGTCCAAGGAATAAGGAGGGTAGTTTTGCTGACATCATTGATCGTGCTCTGGAGAATGAGTTCAAGGAGAATGACCAGAATGAAGCAATTGATGCAGGAAGCTTCAACAACAGCGTAGCAGAGCAGCAGGCAGTTCTGGAGACTGTAGCAAGGGTAAAGTCAAAGAAAAATGATACGAAAGAGGAAAAGTTTCAGCTTCAAAATGTTTTCAATTTGGACAGTGATAATAGAGCTGAAGATACTCCTACATTGATTGATCGAAGGGACAATGTCTTTATCATATCTAACTTCAAATCTAAATATCCAGTGCTGCAGCTAGACTTGAGATTGATCTCAGATTTGGTTATCGTTATTGTCTCTGCAACTTGTGGCGGCATTGCCTTTGCCTGTGCTGGACAACCAGTTATAACTGGATACCTTCTAGCAGGATCTATTATTGGACCGGGAGGATTTAACTTTGTCAGTGAAATGGTGCAAGTTGAAACGGTAGCCCAATTTGGTGTAATTTTTCTTCTTTTTGCACTGGGGCTGGAGTTTTCAACAACTAAGTCATGTGGTGGGAGTGCTTCTGAAGGTGTTTTTGTTGGAGCATTCCTATCAATGTCCTCAACAGCTGTGGTGCTGAAGTTTTTGATGGAAAAGAATTCGGCAAATGCTCTTCATGGACAAGTCACGATCGGCACCCTTATCTTGCAGGACTGTGCTGTTGGGTTACTGTTTGCTTTGCTTCCAGTACTGGGTGGGAATTCTGGTATTCTTCAAGGAGTGATGTCAATGAGTAAAGTGTTGGTGATCTTGGTTACTTTTCTGGTTGTTTTGTCAATTCTATCACGTACATGTGTTCCTTGGCTTTTAAAGTTGATGATAAGTCTATCATCACAGACCAACGAACTATATCAATTAGCCTCAGTGGCATTCTGCTTGCTTGTAGCGTGGTGTAGTGATAAGTTAGGGCTAAGTCTAGAATTGGGCTCCTTTGCTGCTGGAGTGATGATATCGACAACTGATCTTGCTCAACATACACTCGAACAAATAGAGCCTATAAGGAACTTCTTTGCGGCCCTCTTTCTTGCCAGCATTGGAATGCTGATCCACGTTCAGTTTTTATGGAACCATGTTGATATATTACTTGCAGCTGTTATACTGGTGATAATTGTAAAAACAATTGTAATTAGCACAGTGGTGAAGGGATTTGGATATAACAACAGGACATCACTTCTGGTTGGAATGTCTCTGGCTCAAATAGGAGAATTTGCTTTTGTTCTTCTCAGCCGTGCTTCTAATCTCCATCTAGTAGAGGGAAAACTGTATCTGTTGCTTATTGGGACCACAGCTCTCAGTCTGGTAACAACTCCTCTTCTTTTCAAGCTGATACCTGCTGTAGTGCATTTAGGCGTGCTATTGCGGTGGTTCTCTCCAGACAGTCTCGTTGAGATTGGATTTAAAGGAGACATCATCCGCTCAGACAGTGTAAAGCAGCGTGTTATGTTGATGGTCCAGGGACCTCATGATTCATGA 1674 43.01 MLKVSSSSHCISIFIFLLFLCSTRSLPSSAVTLSDSDHPVLANATLQSNNVSSPRNKEGSFADIIDRALENEFKENDQNEAIDAGSFNNSVAEQQAVLETVARVKSKKNDTKEEKFQLQNVFNLDSDNRAEDTPTLIDRRDNVFIISNFKSKYPVLQLDLRLISDLVIVIVSATCGGIAFACAGQPVITGYLLAGSIIGPGGFNFVSEMVQVETVAQFGVIFLLFALGLEFSTTKSCGGSASEGVFVGAFLSMSSTAVVLKFLMEKNSANALHGQVTIGTLILQDCAVGLLFALLPVLGGNSGILQGVMSMSKVLVILVTFLVVLSILSRTCVPWLLKLMISLSSQTNELYQLASVAFCLLVAWCSDKLGLSLELGSFAAGVMISTTDLAQHTLEQIEPIRNFFAALFLASIGMLIHVQFLWNHVDILLAAVILVIIVKTIVISTVVKGFGYNNRTSLLVGMSLAQIGEFAFVLLSRASNLHLVEGKLYLLLIGTTALSLVTTPLLFKLIPAVVHLGVLLRWFSPDSLVEIGFKGDIIRSDSVKQRVMLMVQGPHDS 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 76711752 76736459 + Tan0019192.3 Tan02g1640 744266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1640 557 Pfam Sodium/hydrogen exchanger family 170 233 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Tan02g1640 557 Pfam Sodium/hydrogen exchanger family 237 508 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
Tan02g1640 557 Gene3D - 236 515 IPR038770 -
Tan02g1640 557 Gene3D - 160 235 IPR038770 -
Tan02g1640 557 PANTHER POTASSIUM/PROTON ANTIPORTER-RELATED 235 540 IPR045158 GO:0015386(InterPro)|GO:0071805(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1638 Tan-Chr2:76711752 Tan02g1640 Tan-Chr2:76711752 2.80E-294 dispersed
Tan02g1640 Tan-Chr2:76711752 Tan09g1155 Tan-Chr9:63907897 7.90E-230 dispersed
Tan02g1639 Tan-Chr2:76711752 Tan02g1640 Tan-Chr2:76711752 9.90E-270 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1640 K26735 - csv:101217282 952.199