Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1668 ATGATCACTGAATCAATGCTCCTCAATCCAACGGCCCACATTTCATCCTGGGACTCCCTCGACGATCCCACCGCCGGAATCCCTTCCTATTTCAGTGCCGGTCACGTGTCGCCGCTCGATTCGCCCACGGCGGCGGTCATGGAGTTCGATTCGTCATTCTGGGAGGATCAGGATCTGCCGGCGGCGGTGGACGCGTTCTCCTGCGACAATTTCCGGATGTATGAGTTCAAAGTCCGCACCTGCGCACGTGGGAGGTCGCACGATTGGACCAAATGTCCGTACGCTCACACCGGCGAGAAGGCTCGCCGCCGGGATCCGAGGAAGTTCAACTATTCCGGCGCTGAGTGCCCGGATTTACGCCATGGGTGTTGTAAGAAAGGGGACGCCTGTGAATACGCTCATGGAACCTTCGAAATTTGGCTTCACCCGGACCGGTACCGGACTCAGCCTTGCCGTGACGGAATCGGCTGCCGGCGACGGGTCTGTTTCTTCGCCCATACGTCGGAGCAACTCCGGATTCCGGCGAAACAGAGCCTTAGGTCTCCACGGGCGGCCAAGGAAATTGCTGCCGCTGTATCCTCGCCGACTTCAATCCTAATCTCGCCGTCGTGGGACTCGCCGCCGTTGTCTCCGATCAGCCCTGTAACCACCGGCGGCGAATCGTTCAGCAGATTAGTCGCATTGATGCACAATCTCCAACTTGACGAATTAAAGCCGAAACCTGCCGTTTCCGGCTTCGGTTCAAGTCTCCGGCGAAGCTCTGGCGGATTCGATCTGTGGGACAGAACTTACGAAGAAGAACCAGCAATGGAGAGAGTGGAATCTGGAAGAAACCTCCGAGCCCAAATGTACGCCAAATTAATGAGAGAGAACTCCGTGGACCGAGTCCGGCCACTGATATCAGCCGGATCTCAAAGCTAA 921 57.0 MITESMLLNPTAHISSWDSLDDPTAGIPSYFSAGHVSPLDSPTAAVMEFDSSFWEDQDLPAAVDAFSCDNFRMYEFKVRTCARGRSHDWTKCPYAHTGEKARRRDPRKFNYSGAECPDLRHGCCKKGDACEYAHGTFEIWLHPDRYRTQPCRDGIGCRRRVCFFAHTSEQLRIPAKQSLRSPRAAKEIAAAVSSPTSILISPSWDSPPLSPISPVTTGGESFSRLVALMHNLQLDELKPKPAVSGFGSSLRRSSGGFDLWDRTYEEEPAMERVESGRNLRAQMYAKLMRENSVDRVRPLISAGSQS 306
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 77610667 77612074 - Tan0003283.1 Tan02g1668 744294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1668 306 ProSiteProfiles Zinc finger C3H1-type profile. 110 137 IPR000571 GO:0046872(InterPro)
Tan02g1668 306 SMART c3hfinal6 145 168 IPR000571 GO:0046872(InterPro)
Tan02g1668 306 SMART c3hfinal6 110 136 IPR000571 GO:0046872(InterPro)
Tan02g1668 306 Gene3D - 107 179 - -
Tan02g1668 306 PANTHER UNKEMPT FAMILY MEMBER 56 235 IPR045234 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1668 Tan-Chr2:77610667 Tan09g1181 Tan-Chr9:64142276 1.20E-65 dispersed
Tan01g4650 Tan-Chr1:112358561 Tan02g1668 Tan-Chr2:77610667 5.40E-83 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26766 None None None None Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1668 - - - 0.0