Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1691 ATGAAGTCGATGACTGAGAATGACAATAACAATAACAACAATAATAATAGTTGGTTGGGATTCTCTCTTTCTCCCCACATGAAAATGGAGGTTTCTTCTTCTGATCCTCACCATCACCAGCAACAACACGCTCATAATCCGTACAACCATCACCATTCTCACACTGCTCCAAATAGCTTCTACTTGTCCCCTCATTACGACAACAGCAACACCAACAACAACTCTGAAATTTTCTATGGGATTGCCGACTCTGCTGCTGCTTCCCTCTCTGTAATGCCCCTCAAATCCGACGGCTCTCTCTGTATCATGGAAGCCCTTTCAAGATCCCAAACCGAAGGGATGGTGCCGAGTTCCTCACCCAAGCTGGAGGACTTTCTCGGCGGTGCAACAATGGCGGGTCGAGGCTATTTCAATCAAAATGCCGAATCCGAACCCGACAGGGAACATTCATTGGACCTTCTTCACCGACCCATTAGACATAATCAAGAACATCAGCAGATTTTAATTCCAAATTCCCATCACTACTACTCTGGCTTGGTTCCTTCTTCCATTGGAATCGGAACTTGCGATCCCCAAATTCTTCCCGCGGATGACGACGAAATCCCTTGCCTTAGAAACTGGGTCTCTCGTTCTCACTACGCCGCTACTGCCACTGCCGCCCATAATACGCTGGAGCAGCATATTAACGGCGGTGGCGCTTTGGTGAATGACGGTGGTGGAGGCGGTGGTTCTGCCTCCATTGGCGGAATGAGCTGCGGGGAACTGCAGTCATTGAGCTTGTCGATGAGCCCAGGTTCTCAATCGAGCTCATTCACGGCCCCCGGCCAGATCTCACCACCCGGAGGCGACGGCGCCACCGTCGAAACTAAAAAAAGAGGCTCCGGAAAACTCTGCCAGAAACAGCCCGTTCACCGCAAGTCCATTGATACTTTCGGCCAAAGAACCTCGCAATATCGTGGCGTTACGAGACATAGGTGGACTGGGAGATATGAAGCTCATCTATGGGATAATAGTTGCAAGAAAGAAGGGCAAACTAGGAAAGGAAGACAAGTTTATCTTGGGGGATATGATATGGAAGAAAAAGCTGCAAGAGCTTACGATCTTGCTGCTCTCAAGTACTGGGGACCCTCGACCCATATAAACTTTCCATTGGAGAATTATCAGACTGAACTGGAAGAAATGAAGAATATGAGCCGCCAGGAATATGTTGCCCACTTGAGAAGGAAAAGCAGTGGCTTTTCGAGGGGCGCTTCAGTGTTTCGTGGAGTCACAAGACATCATCAACATGGAAGATGGCAGGCTAGGATTGGGAGAGTTGCTGGAAACAAAGATCTTTATCTTGGGACATTTAGCACGCAAGAGGAAGCGGCTGAGGCTTATGACATAGCAGCAATCAAATTCCGCGGTGTAAATGCAGTCACCAACTTTGACATTTCTAGATATGATGTCGAGAGAATCATGGCTAGTAGTACCCTACTGGCAGGCGAGCTTGCCCGAAGGAACAAGGACGTCGAACCGAGCAGCGACACCATGGCCGTGGTTGCCTACGACTCCTCTGCTGTGCCAAACAACAATGGCGGGATCGGGATCAATCCCGAAGACAATGGATGCAATGGGGATGGTACTGATTGGAAAATGGCATTGTATCAAAATCCATCACATCAGCAACAGCATCACCAACAGGCGGTGGCAGCTGCTGCTGCTGCTTGTGTAGCTGAATCACTGGATCATCATCACAACAAATCCATTACCGCGTCCGGAGGCTATCGTAACGCGTCGTTTTCAATGGCGTTGCAGGACTTGATCGGGATCGAATCATTGAACTCAAATAGTCACGGCATGGAAGACGACGTGAGCAAACAAGTGACTCATTTTTCGAATTCGTCATCGCTGGTGACGAGTTTGAGTAGCTCAAGAGAAGGCAGCCCCGACAAGACAAACGCATCAATGCCATTTGCAAAGCCCCCACCCCTGATGGCATCCAAGCTAATCGGTGCAACGAGCGGTGTCAGCTCGTGGTACCCGTCCCCACAGCAGTTGAGGCCAACAGCCATATCCATGGCACATTTGCCTGTTTTTGCAGCTTGGAATGACACTTAA 2100 49.33 MKSMTENDNNNNNNNNSWLGFSLSPHMKMEVSSSDPHHHQQQHAHNPYNHHHSHTAPNSFYLSPHYDNSNTNNNSEIFYGIADSAAASLSVMPLKSDGSLCIMEALSRSQTEGMVPSSSPKLEDFLGGATMAGRGYFNQNAESEPDREHSLDLLHRPIRHNQEHQQILIPNSHHYYSGLVPSSIGIGTCDPQILPADDDEIPCLRNWVSRSHYAATATAAHNTLEQHINGGGALVNDGGGGGGSASIGGMSCGELQSLSLSMSPGSQSSSFTAPGQISPPGGDGATVETKKRGSGKLCQKQPVHRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCKKEGQTRKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLENYQTELEEMKNMSRQEYVAHLRRKSSGFSRGASVFRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGVNAVTNFDISRYDVERIMASSTLLAGELARRNKDVEPSSDTMAVVAYDSSAVPNNNGGIGINPEDNGCNGDGTDWKMALYQNPSHQQQHHQQAVAAAAAACVAESLDHHHNKSITASGGYRNASFSMALQDLIGIESLNSNSHGMEDDVSKQVTHFSNSSSLVTSLSSSREGSPDKTNASMPFAKPPPLMASKLIGATSGVSSWYPSPQQLRPTAISMAHLPVFAAWNDT 699
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 79514328 79517421 - Tan0011142.1 Tan02g1691 744317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1691 699 FunFam AP2-like ethylene-responsive transcription factor 418 479 - -
Tan02g1691 699 Pfam AP2 domain 317 375 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 Pfam AP2 domain 418 469 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 MobiDBLite consensus disorder prediction 51 67 - -
Tan02g1691 699 ProSiteProfiles AP2/ERF domain profile. 419 477 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 SUPERFAMILY DNA-binding domain 316 385 IPR016177 GO:0003677(InterPro)
Tan02g1691 699 CDD AP2 316 383 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 ProSiteProfiles AP2/ERF domain profile. 317 383 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 MobiDBLite consensus disorder prediction 631 645 - -
Tan02g1691 699 CDD AP2 418 479 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 SMART rav1_2 419 483 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 SMART rav1_2 317 389 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 MobiDBLite consensus disorder prediction 631 654 - -
Tan02g1691 699 SUPERFAMILY DNA-binding domain 418 479 IPR016177 GO:0003677(InterPro)
Tan02g1691 699 PRINTS Ethylene responsive element binding protein signature 459 479 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 PRINTS Ethylene responsive element binding protein signature 318 329 IPR001471 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 MobiDBLite consensus disorder prediction 1 22 - -
Tan02g1691 699 MobiDBLite consensus disorder prediction 258 304 - -
Tan02g1691 699 FunFam AP2-like ethylene-responsive transcription factor ANT 316 385 - -
Tan02g1691 699 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 138 555 - -
Tan02g1691 699 MobiDBLite consensus disorder prediction 258 276 - -
Tan02g1691 699 Gene3D AP2/ERF domain 316 385 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 Gene3D AP2/ERF domain 419 479 IPR036955 GO:0003700(InterPro)|GO:0006355(InterPro)
Tan02g1691 699 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1691 Tan-Chr2:79514328 Tan03g1702 Tan-Chr3:72989291 1.30E-141 dispersed
Tan04g0745 Tan-Chr4:6442026 Tan02g1691 Tan-Chr2:79514328 3.70E-67 transposed
Tan04g2797 Tan-Chr4:87505443 Tan02g1691 Tan-Chr2:79514328 7.30E-103 transposed
Tan06g0485 Tan-Chr6:3599677 Tan02g1691 Tan-Chr2:79514328 2.20E-71 transposed
Tan01g4663 Tan-Chr1:112615755 Tan02g1691 Tan-Chr2:79514328 1.10E-157 wgd
Tan02g1691 Tan-Chr2:79514328 Tan03g1701 Tan-Chr3:72988612 7.00E-159 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26771 PF00847 AP2 1.60E-13 CL0081 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1691 K09285 - csv:101212797 1055.05