Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1711 ATGGGTATTTTCGCTAATCAAAGAGGGTCCAGATCATTGGCCACCGCGGAAGAGTTGCCGGTGTCGAGTGGGGTTCCGATACTACCCAAGAAAAAATGGTCTAATGCGATGCCTCTGTTCATTGCTCTCGTGGTCGTAGCAGAGATTATCTTTCTGGGTCGGCTTGATGTGGCCAAAAATGTAGCCATGGTCGATTCATGGGCCGACTTGTTCTACCGCTCGCCGCCTTCCCGTGCACTGATCAGCGGAGTTGATGATTTGAATTCCCAGTTATTCGACGGCGACCGGATTTCGGAATTGGGGATTTGTGAGGAGTGGTTGGAGAAAGAAGATGCTGTGACGTATTCTAGGGACTTCCAAAAGGAGCCGATATTGGTTTCTGGTTCTGATGAGGGGAGGAAATCTTGTGCCATAGGATGTGAAATTAAGGCTAATCCAAGTAAAGATCCCGATGCTGCTTTTGGTTTAAATCACCAGGGTGGAATGCCTTCAATTCTTCGATCCATGGAATCATCTCTATATTATGCAGAGAACAATATTGCCCAGGCACGACGGAATGGTTATAGTATCGTAATGACCACCAGCCTCTCATCAGATGTACCTGTTGGATACTTCTCCTGGGCCGAGTATGATATCATGGCCCCAGTGCAGGCAAAGAATGAGAGTGTCCTTGCTGCTGCTTTCATTTCAAATTGTGGTGCTCGTAACTTCCGCTTGGAAGCTCTCGAGGCTCTTGAAAAGCTGAACGTCACTATAGATTCATATGGTTCTTGCCACAGAAATCGTGATGGAAGCACAGTGAACAAAGTGGAAACTCTGAAGCGCTACAAGTTCAGCTTGGCTTTTGAGAACTCCAATGAGGAAGATTATGTGACGGAAAAATACTTCCAATCTCTAGTTGCTGGAGCTGTTCCAGTGGTTATTGGAGCTCCAAATATTCAAGAGTTTGGTCCTTCACCTGCTTCACTTTTGCACATCAAGGAGCTTTCAGACGTTGAGTCAGTTGCCAACAATATGAAATACCTTGCAGCAAATCCTGATGCTTTCAACAATTCTTTGAGGTGGAAATATGAGGGTCCATCTGATTCTTTCAAGGCACTATTGGATATGGCAGCAGTTCATTCGTCATGTCGCCTTTGTATTCATTTGGCAACTGGTATTCATGAAACAGAAGAAACGGGTCTAGCGTTCAAAAAGCGACCTTGTAAATGCACCAGAGGTTCGGAGGCTGTTTATCACTTGTATGTAAGAGAAAGAGGAAGGTTTAATTCGGAGTCCATTTTCTTGAGGTCAAGTAGTGTGACTGTAGAAGGGTTGGCATCAGCAGTGGTTTCGAAGTTCAAATCTCTGAAGCACGAACCAATTTGGAAACAGGAGAGGCCTGAAAGCATAAAAGGAGGGGATGAGTTAAGGTTGTATAAAATATACCCAGTTGGGTTAACACAGAGGCAAGCTTTATATACCTTCAGATTTAAAGGGGACTCTGATCTCAGAAGACACATAGAAGATAACCCATGTGCCAAATTTGAAGCCATTTTTGTATAG 1545 44.6 MGIFANQRGSRSLATAEELPVSSGVPILPKKKWSNAMPLFIALVVVAEIIFLGRLDVAKNVAMVDSWADLFYRSPPSRALISGVDDLNSQLFDGDRISELGICEEWLEKEDAVTYSRDFQKEPILVSGSDEGRKSCAIGCEIKANPSKDPDAAFGLNHQGGMPSILRSMESSLYYAENNIAQARRNGYSIVMTTSLSSDVPVGYFSWAEYDIMAPVQAKNESVLAAAFISNCGARNFRLEALEALEKLNVTIDSYGSCHRNRDGSTVNKVETLKRYKFSLAFENSNEEDYVTEKYFQSLVAGAVPVVIGAPNIQEFGPSPASLLHIKELSDVESVANNMKYLAANPDAFNNSLRWKYEGPSDSFKALLDMAAVHSSCRLCIHLATGIHETEETGLAFKKRPCKCTRGSEAVYHLYVRERGRFNSESIFLRSSSVTVEGLASAVVSKFKSLKHEPIWKQERPESIKGGDELRLYKIYPVGLTQRQALYTFRFKGDSDLRRHIEDNPCAKFEAIFV 514
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 79925943 79948151 - Tan0017039.1 Tan02g1711 744337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1711 514 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 170 363 - -
Tan02g1711 514 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 222 385 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
Tan02g1711 514 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 64 486 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Tan02g1711 514 Gene3D - 166 363 IPR038577 -
Tan02g1711 514 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 112 385 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0697 Tan-Chr1:6683348 Tan02g1711 Tan-Chr2:79925943 1.20E-285 dispersed
Tan02g0914 Tan-Chr2:10712947 Tan02g1711 Tan-Chr2:79925943 6.00E-208 dispersed
Tan02g1711 Tan-Chr2:79925943 Tan02g1712 Tan-Chr2:79925943 2.40E-249 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1711 K00753 - csv:101202837 914.835