Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1728 ATGCTGTGCGCTTGTTCAGGAGAGCAATTCAAGTTTGAAGAGCCACCGCAATCCCCGGAGTCACTTGCTACGAGGGATTTCTCGGCCAGTTGCCTTTCCTCGAGAACTGGAGACTGGGATTTAAAATTTGAAGATTCTCAAGTAGATGAAGCTGAATCCACTTTAAGAGAAGCCCTCTCATTGAACTACGAGGAAGCCAGAGCTCTGCTGGGAAGGCTCGAGTATCAAAGAGGAAATTTTGATGCTGCCCTACAGGTATTTCAAGGTATAGACATTAGATCCTTAACGCCAAGAATGATCAAGGCCATCGCTGAAAAGATAAGGGAGGAAAAGCCTCGTCCTAAAGGTGATAGTGCACTCCCTAGTGGTGTAATGTCCATGCATTCTGTTAGTCTACTGCTTGAAGCAATTTTACTCAAGGCAAAATCACTGGAGGAACTTGGCAGATATATAGAGTCTGCAAAAGAGTGCAGGATAATTCTTGATACAGTAGAATCAGCTCTGCCTAATGGAATGCCCGAGTGTATCGGTGAAGACTCCAAATTGCAGGAAATGTTTCACAAAGCTTTGGAATTACTACCTACTTTGTGGATTAAGGGAGGGTATCTTGATGAGGCTATAAATGCCTATCGCAGGGTCCTTGTTAAACCATGGAATTTAGATCCGAACAAGTTGGCTGCCATACAGAAAGAATTGGCTGGCACATTACTCTACGGAGGTGTTGAAGCAAGCCTTCCCCTTAAGTTTCATGTTTTCGGTCCAAGAACACCTAAAAACAATGTAGAAGAAGCAATCCTCTTGTTGCTAATACTCATGAGGAAAGTGGTGATGCAGGAGATAAACTGGGATCCAGAGATTATGAATCATCTGACTTATGCACTTTCTATCACTAGACAATTTGAATTACTCGCTGAGCTTGTGGAGCAGATCCTTCCTGGAATATATAGTCGGGCTGAGAGGTGGTACTTTCTTGCTCTTTGTTACAATGCAGCAGGACAGAATGAAACAGCTTGGAACCTTCTAACGAAAGTTTGCGGTTCCTCTGAAGTAAAGCACCAGCCCCATTTTCACTCTTTTTTGTTGCTTGCAAAGTTGTGTTCAGAGGATACAAAATATGCACGGGATGGAATTAAATTTGCTCACAGAATGATCGGCATGGCCAGTGAACAAAGTAAACATTTCAATTCTGAATCCCACAAATTTTTAGGTGTTTGCTATGGGAACGCAGCAAGAGCTTCTGTATCAGACTCTGAAAGAACTCTTTTCCAAAAAGAATCATTGAACTCCTTTCGAGTTTCTTCTTTCAGTGGGAGGCATGATCCCGAAGTAATGTTCAACATTAGCTTGGAAAATGCTGTGCAGAGAAATCTTGATGTTGCCTTCTACAGTGCAATGGCGTACTCAAATATGGTGGCTGATGGTTCTGGAAGAGGTTGGAAGCTTTTGACCCTCATACTTTCAGCTGAGAGGCGACTCAAGGATGCTGAAACCATAGTCGATTTTGCTTTAGATGAAGCAGAGAGGATGGATCAACTGGATTTTCTTCGATTGAAAGCTGTACTCAAAATTACTCAGGAACAGCCAAAGCAAGCAATAGAAACCTACAGAATCTTGCTAGCTCTAATTCAAGCACGAGAAGAACTTCAGCTTCAGGCTAAGAACTTTGACCAATCTAAGGACTTGGAACTAGAGGCAGTGGCAGAACGTAACTTGGAGCGGGCAGCCTGGCAGGATTTGGCTGCCATATATTCAAAACTTGCTTCCTGGGGTGATGCAGAGATTTGTCTGAATAAAGCCAAGTCATTAGATGTTCATTGCCCCAGAGGTTGGCATACAACAGGCAAGTATTTTGAAGCTCGATCATTACACAAGGAAGCCCTTGTTTCATTCTTAGTTTCTCTATCGATCAATCCCGATTATGTTCCGAGTATCATCTCAACAGCAGAAGTATTGATGAAATGCGGTAGCCAATCACTTCCAATTGCACGCAGCTTGTTGATGAATGCTGTAAGATTGGATCCTACAAGCCATGAAGCATGGTTCAACCTTGGAGTGCTCTCCAAAATGGAAGGTCTGTTGCTACAGGCTGCAGATTTTTTTCAAGCTGCACATGAACTTCAATTATCTGCTCCTCCTCAGAGTTTCGTCTAG 2151 43.05 MLCACSGEQFKFEEPPQSPESLATRDFSASCLSSRTGDWDLKFEDSQVDEAESTLREALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIRSLTPRMIKAIAEKIREEKPRPKGDSALPSGVMSMHSVSLLLEAILLKAKSLEELGRYIESAKECRIILDTVESALPNGMPECIGEDSKLQEMFHKALELLPTLWIKGGYLDEAINAYRRVLVKPWNLDPNKLAAIQKELAGTLLYGGVEASLPLKFHVFGPRTPKNNVEEAILLLLILMRKVVMQEINWDPEIMNHLTYALSITRQFELLAELVEQILPGIYSRAERWYFLALCYNAAGQNETAWNLLTKVCGSSEVKHQPHFHSFLLLAKLCSEDTKYARDGIKFAHRMIGMASEQSKHFNSESHKFLGVCYGNAARASVSDSERTLFQKESLNSFRVSSFSGRHDPEVMFNISLENAVQRNLDVAFYSAMAYSNMVADGSGRGWKLLTLILSAERRLKDAETIVDFALDEAERMDQLDFLRLKAVLKITQEQPKQAIETYRILLALIQAREELQLQAKNFDQSKDLELEAVAERNLERAAWQDLAAIYSKLASWGDAEICLNKAKSLDVHCPRGWHTTGKYFEARSLHKEALVSFLVSLSINPDYVPSIISTAEVLMKCGSQSLPIARSLLMNAVRLDPTSHEAWFNLGVLSKMEGLLLQAADFFQAAHELQLSAPPQSFV 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 80630565 80633236 - Tan0007102.1 Tan02g1728 744354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1728 716 SUPERFAMILY TPR-like 44 342 IPR011990 GO:0005515(InterPro)
Tan02g1728 716 Gene3D Tetratricopeptide repeat domain 34 412 IPR011990 GO:0005515(InterPro)
Tan02g1728 716 Gene3D Tetratricopeptide repeat domain 437 714 IPR011990 GO:0005515(InterPro)
Tan02g1728 716 SUPERFAMILY TPR-like 514 688 IPR011990 GO:0005515(InterPro)
Tan02g1728 716 Coils Coil 485 505 - -
Tan02g1728 716 PANTHER PROTEIN NPG1 1 715 IPR043376 -
Tan02g1728 716 SMART tpr_5 512 545 IPR019734 GO:0005515(InterPro)
Tan02g1728 716 SMART tpr_5 607 640 IPR019734 GO:0005515(InterPro)
Tan02g1728 716 SMART tpr_5 573 606 IPR019734 GO:0005515(InterPro)
Tan02g1728 716 SMART tpr_5 677 710 IPR019734 GO:0005515(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1728 Tan-Chr2:80630565 Tan10g0658 Tan-Chr10:5311663 2.90E-152 dispersed
Tan02g1728 Tan-Chr2:80630565 Tan10g0657 Tan-Chr10:5311663 2.90E-152 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1728 K21843 - csv:101209448 1315.83