Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1741 | ATGGAGGCTTTGGGAGCTTTTTCTGATGGGGAATGGGATTCTTTCACCGCCATGTTCTCATCCCTTCAAGAGCTCGACCAGTCGGTCATGGCGAATAATTCCAATTCCACAGAGCTTCAATTGCCCAGCAATGGCGGCTCTGAGGTTCATAATAATAGCTGGTTTTATTCGTTGGACGCTTTTGATCCCAATTTGCAGAGCTCTGTGAAACAGGACATGAGCTGTAGTAGCTGCAGTACTGATAATTCTAGTGGTAGCTTTTTGTTTGCGAATTCCACAGATTTATTTGTGCCCATTGATGAGAGGAATTTTGGGTCTTCGTTTTTTTCTGATGCTTTGATGGAGGAAGTGGATAAGGGTCTCGCCGGCGCCGCTGAAGATTGCGGCCCTGAGCGATTAGTCGAGAATGTAGTACAGGGTATCCAGCCGCCGCCCCCGCCGCCGCAGCTTGTGGATTCCGACGTTGGTGGAAATCGAAATGAACCAATTATGTTGAAAAGGAAAATCAATAACGGAGTGTTTTCTGATCATCAGAAGAAGAAAACTCGGGTCTCTGTAGATGCGCAAAAAAAGAAGAAAACTCAACCAGGGAAGAAAAATCAGAAGAGAAGAGGGGAAAATGGCGAGGAAGAAGGGAATGGAGGAGCATCAGAAGGACAAAGCTCCATTAGTTACAGTTCAGAGGAGGATAATGGTTCACAGGAGGACCACGGCGGCTCAGCCGCCACTTCCGACGGCGGCTTGAACGGGAAGGGCAGGGCCACCAGAGGATCGGCCACGGACCCCCAAAGCCTCTACGCCAGAAAACGAAGAGAAAGAATCAATGAGCGTTTGAAAATTTTGCAGAAACTTGTTCCCAACGGAACCAAGGTTGATATCAGTACTATGCTTGAAGAAGCAGTTCATTATGTCAAGTTTTTGCAGCTCCAAATCAAGTTATTGAGCTCAGATGACATGTGGATGTTTGCTCCTTTGGCTTACAATGGAATGGACCTTGGTCTTCACCAGAAGCTCTCTCCATTTCTATCACATTGA | 1035 | 46.96 | MEALGAFSDGEWDSFTAMFSSLQELDQSVMANNSNSTELQLPSNGGSEVHNNSWFYSLDAFDPNLQSSVKQDMSCSSCSTDNSSGSFLFANSTDLFVPIDERNFGSSFFSDALMEEVDKGLAGAAEDCGPERLVENVVQGIQPPPPPPQLVDSDVGGNRNEPIMLKRKINNGVFSDHQKKKTRVSVDAQKKKKTQPGKKNQKRRGENGEEEGNGGASEGQSSISYSSEEDNGSQEDHGGSAATSDGGLNGKGRATRGSATDPQSLYARKRRERINERLKILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMWMFAPLAYNGMDLGLHQKLSPFLSH | 344 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 81174060 | 81177049 | - | Tan0005100.1 | Tan02g1741 | 744367 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1741 | 344 | MobiDBLite | consensus disorder prediction | 214 | 229 | - | - | |
Tan02g1741 | 344 | MobiDBLite | consensus disorder prediction | 138 | 270 | - | - | |
Tan02g1741 | 344 | SMART | finulus | 264 | 313 | IPR011598 | GO:0046983(InterPro) | |
Tan02g1741 | 344 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 257 | 320 | IPR036638 | GO:0046983(InterPro) | |
Tan02g1741 | 344 | Gene3D | - | 260 | 316 | IPR036638 | GO:0046983(InterPro) | |
Tan02g1741 | 344 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 258 | 307 | IPR011598 | GO:0046983(InterPro) | |
Tan02g1741 | 344 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 38 | 330 | IPR045843 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER) | |
Tan02g1741 | 344 | FunFam | Basic helix-loop-helix transcription factor | 259 | 316 | - | - | |
Tan02g1741 | 344 | CDD | bHLH_AtIND_like | 259 | 321 | - | - | |
Tan02g1741 | 344 | MobiDBLite | consensus disorder prediction | 172 | 211 | - | - | |
Tan02g1741 | 344 | Pfam | Helix-loop-helix DNA-binding domain | 268 | 308 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1022 | Tan-Chr2:14677850 | Tan02g1741 | Tan-Chr2:81174060 | 7.90E-36 | dispersed | |
Tan02g1741 | Tan-Chr2:81174060 | Tan11g1396 | Tan-Chr11:12413439 | 1.60E-18 | dispersed | |
Tan01g4705 | Tan-Chr1:112934162 | Tan02g1741 | Tan-Chr2:81174060 | 4.80E-41 | wgd | |
Tan01g0640 | Tan-Chr1:6143738 | Tan02g1741 | Tan-Chr2:81174060 | 9.30E-38 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26776 | PF00010 | HLH | 3.80E-09 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1741 | - | - | - | 0.0 |