Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1741 ATGGAGGCTTTGGGAGCTTTTTCTGATGGGGAATGGGATTCTTTCACCGCCATGTTCTCATCCCTTCAAGAGCTCGACCAGTCGGTCATGGCGAATAATTCCAATTCCACAGAGCTTCAATTGCCCAGCAATGGCGGCTCTGAGGTTCATAATAATAGCTGGTTTTATTCGTTGGACGCTTTTGATCCCAATTTGCAGAGCTCTGTGAAACAGGACATGAGCTGTAGTAGCTGCAGTACTGATAATTCTAGTGGTAGCTTTTTGTTTGCGAATTCCACAGATTTATTTGTGCCCATTGATGAGAGGAATTTTGGGTCTTCGTTTTTTTCTGATGCTTTGATGGAGGAAGTGGATAAGGGTCTCGCCGGCGCCGCTGAAGATTGCGGCCCTGAGCGATTAGTCGAGAATGTAGTACAGGGTATCCAGCCGCCGCCCCCGCCGCCGCAGCTTGTGGATTCCGACGTTGGTGGAAATCGAAATGAACCAATTATGTTGAAAAGGAAAATCAATAACGGAGTGTTTTCTGATCATCAGAAGAAGAAAACTCGGGTCTCTGTAGATGCGCAAAAAAAGAAGAAAACTCAACCAGGGAAGAAAAATCAGAAGAGAAGAGGGGAAAATGGCGAGGAAGAAGGGAATGGAGGAGCATCAGAAGGACAAAGCTCCATTAGTTACAGTTCAGAGGAGGATAATGGTTCACAGGAGGACCACGGCGGCTCAGCCGCCACTTCCGACGGCGGCTTGAACGGGAAGGGCAGGGCCACCAGAGGATCGGCCACGGACCCCCAAAGCCTCTACGCCAGAAAACGAAGAGAAAGAATCAATGAGCGTTTGAAAATTTTGCAGAAACTTGTTCCCAACGGAACCAAGGTTGATATCAGTACTATGCTTGAAGAAGCAGTTCATTATGTCAAGTTTTTGCAGCTCCAAATCAAGTTATTGAGCTCAGATGACATGTGGATGTTTGCTCCTTTGGCTTACAATGGAATGGACCTTGGTCTTCACCAGAAGCTCTCTCCATTTCTATCACATTGA 1035 46.96 MEALGAFSDGEWDSFTAMFSSLQELDQSVMANNSNSTELQLPSNGGSEVHNNSWFYSLDAFDPNLQSSVKQDMSCSSCSTDNSSGSFLFANSTDLFVPIDERNFGSSFFSDALMEEVDKGLAGAAEDCGPERLVENVVQGIQPPPPPPQLVDSDVGGNRNEPIMLKRKINNGVFSDHQKKKTRVSVDAQKKKKTQPGKKNQKRRGENGEEEGNGGASEGQSSISYSSEEDNGSQEDHGGSAATSDGGLNGKGRATRGSATDPQSLYARKRRERINERLKILQKLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDMWMFAPLAYNGMDLGLHQKLSPFLSH 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 81174060 81177049 - Tan0005100.1 Tan02g1741 744367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1741 344 MobiDBLite consensus disorder prediction 214 229 - -
Tan02g1741 344 MobiDBLite consensus disorder prediction 138 270 - -
Tan02g1741 344 SMART finulus 264 313 IPR011598 GO:0046983(InterPro)
Tan02g1741 344 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 257 320 IPR036638 GO:0046983(InterPro)
Tan02g1741 344 Gene3D - 260 316 IPR036638 GO:0046983(InterPro)
Tan02g1741 344 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 258 307 IPR011598 GO:0046983(InterPro)
Tan02g1741 344 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 38 330 IPR045843 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0006355(InterPro)|GO:0006357(PANTHER)
Tan02g1741 344 FunFam Basic helix-loop-helix transcription factor 259 316 - -
Tan02g1741 344 CDD bHLH_AtIND_like 259 321 - -
Tan02g1741 344 MobiDBLite consensus disorder prediction 172 211 - -
Tan02g1741 344 Pfam Helix-loop-helix DNA-binding domain 268 308 IPR011598 GO:0046983(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1022 Tan-Chr2:14677850 Tan02g1741 Tan-Chr2:81174060 7.90E-36 dispersed
Tan02g1741 Tan-Chr2:81174060 Tan11g1396 Tan-Chr11:12413439 1.60E-18 dispersed
Tan01g4705 Tan-Chr1:112934162 Tan02g1741 Tan-Chr2:81174060 4.80E-41 wgd
Tan01g0640 Tan-Chr1:6143738 Tan02g1741 Tan-Chr2:81174060 9.30E-38 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26776 PF00010 HLH 3.80E-09 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1741 - - - 0.0