Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1769 ATGGCTACTCCTCGTCAAATTGTTCAGTTCATTAATGCCGTAGCTTTCTTCAAGTACTGCATATTTCTTGGTGTTGGATCAACCATGCTAAGCATCGACACTGACAAAATGGCGTTGCTTTCATTCAAGTCTCGACTCGGCTCATCAACTGTCACCTCTCTGTCTTCATGGAACCAAAATTCATCGCCCTGTAATTGGACTGGTGTCAGCTGCAGCAAATACGGCACCAGAAGAGTAGTAAAACTTCATCTTTCTGGCTTGGGACTGTTAGGCTCGATAGATCCTCATGTTGGGAATCTCTCCTTCCTTCAATCTCTTCAACTTCAAAACAACCAATTCACAGGGCCAATTCCTAAACAAATCAATAATCTTTTGAACCTGAGAGTTGTAAACATGAGTTTCAACGACTTACAAGGGGGGATTCCCTTCAACTTCAGCGCAATGCTTGCTCTTGAGATTCTTGATTTGACGGCTAATAAAATCACAGATCGACTTCCTGAAGAAATGGGTCTTTTAACCAAGCTTCAAGTCTTTAACTTGGGACGAAACCAACTCTACGGTACAATTCCCGCAGCCATTGGGAATAGTTCCTCGCTCGTTACTCTCAACTTAGGGACTAACTCTCTGAGTGGATCGATTCCAAGCCAAGTGGGTGACCTTCAAAATCTCAACCATCTTGTGCTTCGACTCAATGATCTCTCTGGTTTAGTTCCACCCAATGTGTTCAACAAGTCATCACTAATCACCTTTGCTTTAGCTTCAAACAGATTTGAGGGTACATTTCCAGCTGACATTGGAGACAATCTCCCCAATCTTTCAGTCTTCCACTTTTGCTTCAATCAATTTACTGGAACAATCCCTCACTCAATCCACAACATGACGAAAATTCAAGTCCTACGCTTTGCCCACAATTATTTTCGTGGAACTCTGCCACCAGGTTTGGAAAATCTCCCTCAACTTTCAAATTACAATATTGGGTCGAATAAAATTGTCAGTGTGGGTGATAATGGACTTAGTTTCATAACTTCTTTGACAAACAACTCGCATCTCAAGTACTTTGCAATTGATGATAATCAATTGGAGGGTCTAATTCCAGAAACTATTGGAAATCTTTCAAAGGATCTTTCAATATTGAACATGGGTGGGAATCGTATGTATGGCAATATACCCTCCTCAATTTCTAATTTGCGTGGCTTGTCTCTGCTAAATTTGAGCGAGAACGTGTTATCAGGTGAAATCCCACCTCAAATTGGGAAGTTGGAAAATCTACAAATGCTTGGTTTGGCCAGGAATCGATTTTCTGGTAACATCCCAAGCTCCATGGGAGATCTTCATAAGTTGATTCAAGTTGATTTGTCAGGAAACAGTTTAATTGGTGAAATACCCACCTCTTTTGGAAACTTTGTGAATCTATTCTCGTTGGATTTGTCCAACAATATGCTTGAAGGAAGGATACCGAGAGAGGCTCTTACTTTGTCTTATTTGAGCAAGCTTTTAAATCTATCCAATAACCTTTTTACTGGGTCTCTGCCGAAAGAAATTGGGTTACTAAAAAATGTTGTTGCCATTGATATCTCTAATAACCATATCTCTGGTAATATTGTCCCTTCAATCAGTGGTTGCAAAAGCTTAGAGGTACTGATAATGGCCAGAAATGAATTCTCAGACATGGCTTCCCACTTCCAATTTGCCATTTTCACTGCCATTATAGTTTTGAAATATTGTTCGTTTCCTGGTGTTGGGTCAGCCACTCTCAATCTTGACACAGACAAACAAGCTCTAATTGCCATCAAGTCTGTATTTCAAAACATTCGGCCTCCAAATCCTCTGTCTTCATGGAATAATAATCAAACTTCATCTCCCTGCAACTGGGTCGGCGTTACCTGCGACAGAAATGGAAGTCGAGTGGTTGGCTTGAAGCTTACCGGCTTTCAACTCTCAGGCTCCATCGATCCTCATGTTGGGAACCTCTCTTTCCTTCGTTCACTTCAACTCCAGAGCAATCAATTCACAGGGCCGATCCCAATTCAAATCACCAATCTTTTTCGCTTGAGAGTTTTGAATATGAGTTTCAACAATTTAGAAGGCCAATTACCTTCCAACATCAGCAGAATGGCTGATCTCGAGATCCTTGACTTGACCTCCAACAGAATCAATGGGAGACTCCCTGACGAACTCAGCCACTTGACCAAGCTTCAAGCTCTGATTTTGGCACAAAACCAACTCTACGGTGCAATCCCACCATCTTTTGGAAATCTTTCTTCGCTTGTTACAATAAATTTAGGCACAAATTCAATTAGTGGCCCCATTCCCAGCCAACTAGCTGACCTTCCAAACTTGAAGAACCTGATTATCACCATTAACAACCTTTCTGGCTCTGTTCCTCCCGGCATATTCAACATGTCTTCCTTAGTCACTCTGGCATTGGCCTCCAACCAACTTTGGGGAACATTTCCCAAAGATATCGGAGAAAAGCTCCCAAATCTTTTAGTCTTCAATTTTTGCTTCAACAAATTTACAGGAACGATCCCTGAATCGTTGCATAACATTACAAGAATACAAGTCATACGCTTCGCACACAATTTTCTCGAAGGGGCAGTCCCAGCAGGTCTCGAGAAGCTTCACGATCTCTCAATGTACAACATTGGATACAACAAGTTTGTGGGTTCAGATGCAAATGGGGGCCTCGATTTCATCACTTCCTTGACGAACAGCTCTCGCCTTGCCTTTCTAGCTCTCGATGGGAACAATTTTGAGGGTGTGATTCCCGATTCCATTGGGAATCTCTCCAAGGATCTTTCTAAGTTGTACATGGGAGAGAATCGTCTATATGGGAATATACCCACCACAATTTCTAATCTGCAGGGGTTGTCTCTGCTAAATTTGAGCGACAACTCGTTATCAGGTGAAATCCCATCTCAAATTGGCAAATTGGATAAACTTCAAATGCTTGTTTTGGCAAGGAATCGATTTTCTGGTGGTATTCCAAGTTCTTTGGGTGATCTTCGAATGTTAAATCAAATTGATTTATCAGGAAACGATTTGGCTGGTAACGTACCCTCCTCTTTTGGGAACTTTATGAATCTACTCTCCTTGGATTTGTCCAAAAATAAGCTCAATGGAAGTATACCGAGAGAGACTCTCAATTTGCCTGGTTTAAGTAAAGTTTTAAATTTGTCCAACAACCTTTTCACTGGGTCTCTTCCTGAAGAAATTGGGTCTCTTGAAAATGTTGTCACCATCGATATCTCTAATAACCAAATCTCTGGTAATATTCCTCTTTCAATTAGTGGTTGCAAAAGCTTGGAGGTATTGTCAATGGCCAACAATGAATTCTCAGGTCCTATTCCAAGAGCTTTAAAAGATCTTAGAGGCCTCCAGCTTCTGGATCTCTCCTCGAACCATCTTTCAGGCCCCATTCCTAATGAGCTTCAACAATTAAAAGCTCTTCAAACTCTAAACCTCTCTTTCAACGATCTCGAGGGAGTTGTTCCAACAGAGTTTGAAAATATCACTAACCTTTATTTGCAAGGCAATCCAAAGCTTTGTGATGAATATTTCTCATGTGCAGCGACAGGGACAAAAGGAAAGGTGATTAAAATTGTTGTCATCTCCGTTTTATCAGCACTGTTAGCAATATTTCTTGTATTTGGTACTGTGGTTTACTTCATGAGAAGAAAATCAAATGATTCATCGTCATTATCAACTGAATTTCTAAAGGGGAAGCCTGAAATGATCTCGTATCGTGAGCTCTGTTTGGCAACCGAGAATTTCAGCCCAAAAAATTTGATTGGAAAAGGGAGCTTTGGGACAGTCTACAAAGGCTATTTGGAACAGGGGATTGCTATTGCAGTGAAGGTGCTTAACACTGAAAGGGCTGGTTCTGTGAGGAGCTTTCTTGCAGAGTGTGAGGCTCTACGAAATGTGAGACATCGAAATCTTGTTAAACTAATCACATCGTGCTCTAGCATAGACTTCAAACACAAGGAGTTTCTTGCTTTGGTTTATGAGTTTCTAAGCAATGGAAGCTTGGATTCATGGATTCATAAGCACAAACTTCATGCAGACGGAAGTGGGCTAAATTTACTAGAGAGATTGAACATTGCCATTGATGTTGCATCCGTGTTGGATTACCTCCATAATGGTTACGATGTTCCAATTGTTCACTGCGATTTAAAGCCCAGCAACATCATCTTATCGGACGACATGACTGCAAAAGTTGGAGATTTTGGGTTAGCTCGTTTGCTGATGGAAGGTGAAAATGACCAATCTTCTTCCATTACTTCCAGTCATATCTTAAAGGGTTCCATTGGCTACGTTCCTCCAGAATATGGACTGGGAAGAAAGCCTACAACAGCTGGAGATGTGTATAGTTATGGAGTAACATTGTTGGAGCTTTTTACAGGGAAATGTCCAACTCATGAAAGTTTTTCAGGAGAGCTCAGTTTGATCAAATCGGTTCAATTGGCTTATCCAAAGGAAATGGATGAAATTGTCGACGCTGCGCTGTTAGAATCACGTTTCAACTTATGCTATCAAGAACAAGAGATTGACCCAACTAAACAGTATGATTGTCTTATTGATGTCATGAGTGTTGGACTCTCTTGCACTGCAAATTCGCCTGAAAAACGCATTAGCATGAAAGACGTCTTTTTAAAGCTCAAGATGATAAGAGCCACTCTTATCCATCATTCAAATGGGAATGATGAGTAA 4713 40.97 MATPRQIVQFINAVAFFKYCIFLGVGSTMLSIDTDKMALLSFKSRLGSSTVTSLSSWNQNSSPCNWTGVSCSKYGTRRVVKLHLSGLGLLGSIDPHVGNLSFLQSLQLQNNQFTGPIPKQINNLLNLRVVNMSFNDLQGGIPFNFSAMLALEILDLTANKITDRLPEEMGLLTKLQVFNLGRNQLYGTIPAAIGNSSSLVTLNLGTNSLSGSIPSQVGDLQNLNHLVLRLNDLSGLVPPNVFNKSSLITFALASNRFEGTFPADIGDNLPNLSVFHFCFNQFTGTIPHSIHNMTKIQVLRFAHNYFRGTLPPGLENLPQLSNYNIGSNKIVSVGDNGLSFITSLTNNSHLKYFAIDDNQLEGLIPETIGNLSKDLSILNMGGNRMYGNIPSSISNLRGLSLLNLSENVLSGEIPPQIGKLENLQMLGLARNRFSGNIPSSMGDLHKLIQVDLSGNSLIGEIPTSFGNFVNLFSLDLSNNMLEGRIPREALTLSYLSKLLNLSNNLFTGSLPKEIGLLKNVVAIDISNNHISGNIVPSISGCKSLEVLIMARNEFSDMASHFQFAIFTAIIVLKYCSFPGVGSATLNLDTDKQALIAIKSVFQNIRPPNPLSSWNNNQTSSPCNWVGVTCDRNGSRVVGLKLTGFQLSGSIDPHVGNLSFLRSLQLQSNQFTGPIPIQITNLFRLRVLNMSFNNLEGQLPSNISRMADLEILDLTSNRINGRLPDELSHLTKLQALILAQNQLYGAIPPSFGNLSSLVTINLGTNSISGPIPSQLADLPNLKNLIITINNLSGSVPPGIFNMSSLVTLALASNQLWGTFPKDIGEKLPNLLVFNFCFNKFTGTIPESLHNITRIQVIRFAHNFLEGAVPAGLEKLHDLSMYNIGYNKFVGSDANGGLDFITSLTNSSRLAFLALDGNNFEGVIPDSIGNLSKDLSKLYMGENRLYGNIPTTISNLQGLSLLNLSDNSLSGEIPSQIGKLDKLQMLVLARNRFSGGIPSSLGDLRMLNQIDLSGNDLAGNVPSSFGNFMNLLSLDLSKNKLNGSIPRETLNLPGLSKVLNLSNNLFTGSLPEEIGSLENVVTIDISNNQISGNIPLSISGCKSLEVLSMANNEFSGPIPRALKDLRGLQLLDLSSNHLSGPIPNELQQLKALQTLNLSFNDLEGVVPTEFENITNLYLQGNPKLCDEYFSCAATGTKGKVIKIVVISVLSALLAIFLVFGTVVYFMRRKSNDSSSLSTEFLKGKPEMISYRELCLATENFSPKNLIGKGSFGTVYKGYLEQGIAIAVKVLNTERAGSVRSFLAECEALRNVRHRNLVKLITSCSSIDFKHKEFLALVYEFLSNGSLDSWIHKHKLHADGSGLNLLERLNIAIDVASVLDYLHNGYDVPIVHCDLKPSNIILSDDMTAKVGDFGLARLLMEGENDQSSSITSSHILKGSIGYVPPEYGLGRKPTTAGDVYSYGVTLLELFTGKCPTHESFSGELSLIKSVQLAYPKEMDEIVDAALLESRFNLCYQEQEIDPTKQYDCLIDVMSVGLSCTANSPEKRISMKDVFLKLKMIRATLIHHSNGNDE 1570
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 82075838 82088022 + Tan0015743.1 Tan02g1769 744395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1769 1570 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 752 821 - -
Tan02g1769 1570 SUPERFAMILY Protein kinase-like (PK-like) 1233 1554 IPR011009 -
Tan02g1769 1570 Pfam Leucine rich repeat 1077 1136 IPR001611 GO:0005515(InterPro)
Tan02g1769 1570 Pfam Leucine rich repeat 683 742 IPR001611 GO:0005515(InterPro)
Tan02g1769 1570 Gene3D Phosphorylase Kinase; domain 1 1219 1338 - -
Tan02g1769 1570 Gene3D Transferase(Phosphotransferase) domain 1 1339 1568 - -
Tan02g1769 1570 PANTHER OS04G0122200 PROTEIN 594 1556 IPR051809 -
Tan02g1769 1570 SUPERFAMILY L domain-like 34 330 - -
Tan02g1769 1570 Gene3D Ribonuclease Inhibitor 650 896 IPR032675 -
Tan02g1769 1570 Gene3D Ribonuclease Inhibitor 584 649 IPR032675 -
Tan02g1769 1570 PRINTS Leucine-rich repeat signature 1123 1136 - -
Tan02g1769 1570 PRINTS Leucine-rich repeat signature 1029 1042 - -
Tan02g1769 1570 FunFam LRR receptor-like serine/threonine-protein kinase EFR 894 1194 - -
Tan02g1769 1570 Gene3D Ribonuclease Inhibitor 197 334 IPR032675 -
Tan02g1769 1570 CDD STKc_IRAK 1264 1555 - -
Tan02g1769 1570 SUPERFAMILY L domain-like 903 1184 - -
Tan02g1769 1570 SUPERFAMILY L domain-like 594 889 - -
Tan02g1769 1570 FunFam LRR receptor-like serine/threonine-protein kinase EFR 1229 1338 - -
Tan02g1769 1570 Gene3D Ribonuclease Inhibitor 32 192 IPR032675 -
Tan02g1769 1570 SMART LRR_sd22_2 1147 1173 - -
Tan02g1769 1570 SMART LRR_sd22_2 729 755 - -
Tan02g1769 1570 SMART LRR_sd22_2 372 398 - -
Tan02g1769 1570 SMART LRR_sd22_2 1075 1107 - -
Tan02g1769 1570 SMART LRR_sd22_2 930 956 - -
Tan02g1769 1570 SMART LRR_sd22_2 705 728 - -
Tan02g1769 1570 SMART LRR_sd22_2 468 503 - -
Tan02g1769 1570 ProSiteProfiles Protein kinase domain profile. 1258 1557 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1769 1570 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 343 561 - -
Tan02g1769 1570 SMART serkin_6 1258 1557 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1769 1570 SMART LRR_typ_2 172 196 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 954 978 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 100 124 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 777 801 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 729 752 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 1123 1146 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 444 467 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 468 492 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 1002 1025 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 681 705 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 220 244 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 1050 1075 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 396 420 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 1147 1170 IPR003591 -
Tan02g1769 1570 SMART LRR_typ_2 148 171 IPR003591 -
Tan02g1769 1570 Gene3D Ribonuclease Inhibitor 897 1191 IPR032675 -
Tan02g1769 1570 Gene3D Ribonuclease Inhibitor 335 573 IPR032675 -
Tan02g1769 1570 Pfam Protein tyrosine and serine/threonine kinase 1262 1551 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g1769 1570 ProSitePatterns Protein kinases ATP-binding region signature. 1264 1286 IPR017441 GO:0005524(InterPro)
Tan02g1769 1570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1387 1399 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g1769 1570 Pfam Leucine rich repeat N-terminal domain 588 630 IPR013210 -
Tan02g1769 1570 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Tan02g1769 1570 Pfam Leucine Rich Repeat 957 978 IPR001611 GO:0005515(InterPro)
Tan02g1769 1570 Pfam Leucine Rich Repeat 447 468 IPR001611 GO:0005515(InterPro)
Tan02g1769 1570 Pfam Leucine Rich Repeat 1055 1075 IPR001611 GO:0005515(InterPro)
Tan02g1769 1570 Pfam Leucine Rich Repeat 1150 1170 IPR001611 GO:0005515(InterPro)
Tan02g1769 1570 Pfam Leucine Rich Repeat 399 420 IPR001611 GO:0005515(InterPro)
Tan02g1769 1570 Pfam Leucine Rich Repeat 980 1002 IPR001611 GO:0005515(InterPro)
Tan02g1769 1570 Pfam Leucine Rich Repeat 1005 1026 IPR001611 GO:0005515(InterPro)
Tan02g1769 1570 Pfam Leucine Rich Repeat 103 124 IPR001611 GO:0005515(InterPro)
Tan02g1769 1570 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 73 340 - -
Tan02g1769 1570 SUPERFAMILY RNI-like 237 563 - -
Tan02g1769 1570 FunFam Leucine-rich repeat receptor-like protein kinase 587 748 - -
Tan02g1769 1570 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 1339 1566 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1769 Tan-Chr2:82075838 Tan08g2106 Tan-Chr8:73032044 3.60E-86 dispersed
Tan02g1766 Tan-Chr2:81854030 Tan02g1769 Tan-Chr2:82075838 8.30E-137 proximal
Tan02g1769 Tan-Chr2:82075838 Tan02g1770 Tan-Chr2:82168475 5.80E-137 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67231 PF07714 PK_Tyr_Ser-Thr 1.30E-39 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1769 - - - 0.0