Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1799 ATGTCTAATTATGCCTTCTTGAATGATCAGCTCTCGAGGAGGACCTCCATTTTTGGTTTGCGCTTGTGGGTCGTTCTGGGAATTTGCGTTGGTGCCGCCATTGTTATCGTTCTGTTCCTCATTTCGCTGTGGTTCACTTCCAGGCGCAACAGTGCGTCTAAATCTAAGCCCTCTCTGAACCCCACCATCCCAAATGTCTCCAAGGAAATCCAGGAAATACGAATCGACCATTCTCGGAACCCGACTCATTCTGACCCAAAAGTTCAGTTGGCTTCTAACCCTGAGCCCTTGCCAGAGGCAGAGCCTTTAGCGACGCTGCTTCAGACGGAGGAAGGGAGCCCAGGTAGTGGACGCCATAGAATTCACATTGAAATTGGGAAGGACCACCGGATTTCGTACCCGGAGAGGGGCGGCGGTTCGTCTCATGGTAGCGGAGAGGCTCGGTCCGGTGATCAGGCGCCGGTGGCTGTGCCGGAGGTTTCGCATTTGGGTTGGGGACATTGGTATACTCTCAGAGAGCTCGAGTATTCTACTAATGGTTTTGCAGATGAAAATGTCATTGGGGAAGGCGGATATGGAATTGTGTATCGTGGTGTTCTGGAGGACAACACTGTGGTAGCTATCAAAAACTTGCTTAATAACAGGGGACAAGCGGAGAAGGAGTTTAAGGTTGAAGTGGAAGCAATTGGACGCGTTCGGCACAAGAATCTGGTGCGTTTGCTAGGCTATTGTGCTGAAGGAGCTCATAGGATGCTTGTTTACGAGTACGTTGATAATGGAAACTTGGAGCAGTGGCTTCATGGAGAAGTTGGGCCTTGTAGTCCTCTCACATGGGACATTCGAATGAATATAATTGTTGGAACAGCAAAAGGGTTAACGTACCTCCACGAGGGGCTTGAGCCTAAGGTTGTTCATCGCGATATTAAGTCAAGTAACATTTTGCTTGACAAGCAATGGAATCCTAAGGTCTCTGACTTTGGCCTAGCAAAGCTTCTTGGCTCAGAGAGGAGTTATGTAACAACTCGTGTAATGGGAACTTTTGGATATGTTGCTCCTGAATATGCTAGTACTGGCATGCTAAATGAAAAAAGTGATGTATATAGCTTTGGCATTCTCATTATGGAGATAATTTCAGGGAGAAATCCAGTAGATTATAGCCGCCCTTCAGGAGAGGTCAACCTAGTTGAGTGGCTTAAAACAATGGTTAGTAATCGAAATGCAGAGGGAGTTCTGGATCCTAAGTTGCCTGAGAAGCCTTCAACAAGGGCGCTAAAGCGTGCTCTGTTAGTAGCTTTACGGTGCGTGGATCCTAATGTTCAGAAGAGGCCTAAAATGGGGCATGTAATTCATATGCTTGAAGCTGATGAGTTCCCTTTTCGAGATGATCGTAGAGTGGGACGGGAACCAGGACGATCACTGCTAAAGGAAAAGCTCATGGAAAGGCTTGTGAGTGAGTCTGGAGACAGCAGTGGATATGAAAGTGGAGCAACTCAAGCAAGCCGACATCTATGGAAAAAGCAAGAACATGAAGAGCAACAGCCTCGCGAACCTCACACTTTAAGGTGA 1566 47.45 MSNYAFLNDQLSRRTSIFGLRLWVVLGICVGAAIVIVLFLISLWFTSRRNSASKSKPSLNPTIPNVSKEIQEIRIDHSRNPTHSDPKVQLASNPEPLPEAEPLATLLQTEEGSPGSGRHRIHIEIGKDHRISYPERGGGSSHGSGEARSGDQAPVAVPEVSHLGWGHWYTLRELEYSTNGFADENVIGEGGYGIVYRGVLEDNTVVAIKNLLNNRGQAEKEFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGEVGPCSPLTWDIRMNIIVGTAKGLTYLHEGLEPKVVHRDIKSSNILLDKQWNPKVSDFGLAKLLGSERSYVTTRVMGTFGYVAPEYASTGMLNEKSDVYSFGILIMEIISGRNPVDYSRPSGEVNLVEWLKTMVSNRNAEGVLDPKLPEKPSTRALKRALLVALRCVDPNVQKRPKMGHVIHMLEADEFPFRDDRRVGREPGRSLLKEKLMERLVSESGDSSGYESGATQASRHLWKKQEHEEQQPREPHTLR 521
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 83362068 83365752 + Tan0015485.1 Tan02g1799 744425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1799 521 MobiDBLite consensus disorder prediction 487 501 - -
Tan02g1799 521 CDD STKc_IRAK 187 453 - -
Tan02g1799 521 SUPERFAMILY Protein kinase-like (PK-like) 162 453 IPR011009 -
Tan02g1799 521 Gene3D Phosphorylase Kinase; domain 1 156 256 - -
Tan02g1799 521 Pfam Protein kinase domain 183 450 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1799 521 ProSitePatterns Serine/Threonine protein kinases active-site signature. 303 315 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Tan02g1799 521 MobiDBLite consensus disorder prediction 131 154 - -
Tan02g1799 521 FunFam Putative receptor-like serine/threonine-protein kinase 257 467 - -
Tan02g1799 521 MobiDBLite consensus disorder prediction 482 521 - -
Tan02g1799 521 MobiDBLite consensus disorder prediction 502 521 - -
Tan02g1799 521 ProSiteProfiles Protein kinase domain profile. 181 439 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Tan02g1799 521 FunFam Probable serine/threonine-protein kinase At1g01540 161 256 - -
Tan02g1799 521 Gene3D Transferase(Phosphotransferase) domain 1 257 463 - -
Tan02g1799 521 PANTHER OS01G0323000 PROTEIN 6 490 IPR052232 -
Tan02g1799 521 ProSitePatterns Protein kinases ATP-binding region signature. 187 209 IPR017441 GO:0005524(InterPro)
Tan02g1799 521 SMART serkin_6 181 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan01g0197 Tan-Chr1:1785814 Tan02g1799 Tan-Chr2:83362068 3.30E-74 dispersed
Tan02g0803 Tan-Chr2:8162131 Tan02g1799 Tan-Chr2:83362068 6.90E-142 dispersed
Tan02g0804 Tan-Chr2:8162131 Tan02g1799 Tan-Chr2:83362068 6.90E-142 dispersed
Tan02g1799 Tan-Chr2:83362068 Tan05g0624 Tan-Chr5:4631506 1.10E-148 dispersed
Tan10g0239 Tan-Chr10:2138535 Tan02g1799 Tan-Chr2:83362068 4.80E-170 transposed
Tan02g1799 Tan-Chr2:83362068 Tan03g1548 Tan-Chr3:71788868 2.20E-205 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
67233 PF00069 Pkinase 1.20E-47 CL0016 Tan PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1799 - - - 0.0