Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1808 | ATGGATATTGACCATGAAAAGTCTGGGGATCAGATGGATATTCTGACTATGATTCAGCAGATGGGAAAATTTCCTGAGTTTTTTGAATTTACTGAATTGCCATCCTCTGCTTTTGCTTTTGGTAGTTCCAATATTGGTGCCACTTCAAATCTCTTGCAAAACCCAAATCCCACTTTTCATTCTTCTAATCTCCCATCCACCGTTTCTTTTAATAACGCCGCTGACCCTGTTGGACCGCCGTGCTTTCTGCCGTATTCCGCCGCTGGCCGCTGGAGAACCCATGTTGCCGCCACCAGAAATGCCGACACGAAGCAGAATTCAATGGCGGCGATGAGGGAGATGATCTACCGTATAGCGGCGATGCAGCCGATCCACATAGACCCAGAATCAGTAAAACCACCGAAACGGCGGAACGTGAAGATCTCAAAAGACCCACAAAGCGTAGCGGCGCGGCATAGAAGAGAGAGAATAAGCGAGAGAATTAGAATCCTTCAAAGAATAGTCCCCGGCGGCACCAAAATGGACACCGCTTCCATGTTAGACGAGGCCATTCATTACGTCAAGTTCTTGAAAAACCAAGTCCAATCCCTTGAAATTGCCGCCGCCAATCGCTCCACCGGCGTCGGCCTTCCGCCCGGCGGGAGTCATTATAAACAGTTCCAAATTATTGCTCAAAGTGGACATGAGCACGTGAATGAATGA | 702 | 48.29 | MDIDHEKSGDQMDILTMIQQMGKFPEFFEFTELPSSAFAFGSSNIGATSNLLQNPNPTFHSSNLPSTVSFNNAADPVGPPCFLPYSAAGRWRTHVAATRNADTKQNSMAAMREMIYRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYVKFLKNQVQSLEIAAANRSTGVGLPPGGSHYKQFQIIAQSGHEHVNE | 233 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 83613506 | 83615218 | + | Tan0021863.1 | Tan02g1808 | 744434 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1808 | 233 | Gene3D | - | 140 | 206 | IPR036638 | GO:0046983(InterPro) | |
Tan02g1808 | 233 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 145 | 199 | IPR036638 | GO:0046983(InterPro) | |
Tan02g1808 | 233 | Pfam | Helix-loop-helix DNA-binding domain | 150 | 191 | IPR011598 | GO:0046983(InterPro) | |
Tan02g1808 | 233 | PANTHER | TRANSCRIPTION FACTOR HEC3-RELATED | 62 | 206 | IPR045843 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g1808 | 233 | FunFam | BHLH transcription factor | 144 | 207 | - | - | |
Tan02g1808 | 233 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 141 | 190 | IPR011598 | GO:0046983(InterPro) | |
Tan02g1808 | 233 | SMART | finulus | 147 | 196 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1808 | Tan-Chr2:83613506 | Tan05g1685 | Tan-Chr5:49618688 | 4.10E-39 | dispersed | |
Tan01g4766 | Tan-Chr1:113495252 | Tan02g1808 | Tan-Chr2:83613506 | 7.60E-55 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26783 | PF00010 | HLH | 1.70E-06 | No_clan | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1808 | - | - | - | 0.0 |