Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan02g1829 | ATGGCTCAAATTTTTTTACTCTTTCCCATCTTTCTTCTCCCTCTTCTTCTTCTTGTACCTCTAATTTTCTTTCATAACCAAAGGAACAAGCAAATTGCAAAGAAGCTCCCTCCTGGCTCAATGGGCTGGCCTCTAATTGGCGAGACCTTCCATTTCTACTCTCAACACCCCACCTCTTTCTTTTTTGGAAAGCAAAAAAGATATGGAGAGATATTCAAGACCCACATTCTTGGATGTCCGTGTGTGATGTTGGCGACTCCGGAGGCAGCTCGGTTAGTGCTAGTGACACATGCTCATCTGTTCAAGCCCACATACCCAGAAAGCAAAGAGCGTCTAATCGGACCATCGGCTCTGTTTTTCCACCAAAGTGAAACCCATTTGCGGCTGCGTAAGCTAATCCAAAGCTCACTCTCGCCGGAACCTGTTCGGAGCTTGGTCCCTGACATCCACTCCCTCGCCATCTCTGCATTGCCCTCATCCCTCCATGGCCATCTCATCAACACTTTCCATCAAATGAAGAAGTTCTCTTTTGAAGTCGGAATTTTGGCGATTTTTGGGCATTTGGAGGACGAAAATTACAGAGAAGAATTAATGAAGAACTATTCCATAGTGAACAAAGGCTATAATTCTTTTCCAACCAACATTCCCGGAACGGTTTACAAAAAAGCACTTAAAGCAAGAAAGAGGCTGGGAGAGATCATAAGCTGCATAATCTCAGAGAAAAAAGAGAAGGGAAAAGAATTGGTGGAGAAGAATTTATTGGGGAGTTTATTAAAATGGAGAGATGAAAAAGGAGAAAGTTTAAGTGATGAACAGATTGCTGACAATATAATTGGAGTTTTATTTGCTGCTCAGGACACCACGGCTAGTGTTCTGACATGGGTTGTTAAATATCTACATGACAACCAGAAAGTTCTAGAAGCTGTCAAGGTGGAGCAAAAGGCAATTGAAGAATGCATTAATGGGGGGAGCCGACCAATGAGTTGGGCTCAGACACGAAACATGCCGTTTACCAACAAGGTGGTGTTGGAGAGCTTGAGAATGGCGAGTATTATATCATTCACTTTTAGGGAAGCTGTGGCAGATGTTGAATACAATGGATATTTAATTCCAAAGGGTTGGAAAGTAATGCCTTTATTCAGGAATATTCATCACAATCCTGACTACTTTGTTGACCCACACAAATTTGATCCTTCAAGATTTGAGGTTGCACCAAGACCCAATACATTCATGCCATTTGGCAGTGGGGTCCATTCCTGCCCTGGAAATGAGCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTGGTCACCAAATTCAGGTGGGAATTGGCAGGAGAGAGAGATGGGATTCAACATGGGCCATTTCCAGTGCCTATGGATGGGCTTCCAATCAGAGTCTGGAGAATATCCAATTGA | 1422 | 43.25 | MAQIFLLFPIFLLPLLLLVPLIFFHNQRNKQIAKKLPPGSMGWPLIGETFHFYSQHPTSFFFGKQKRYGEIFKTHILGCPCVMLATPEAARLVLVTHAHLFKPTYPESKERLIGPSALFFHQSETHLRLRKLIQSSLSPEPVRSLVPDIHSLAISALPSSLHGHLINTFHQMKKFSFEVGILAIFGHLEDENYREELMKNYSIVNKGYNSFPTNIPGTVYKKALKARKRLGEIISCIISEKKEKGKELVEKNLLGSLLKWRDEKGESLSDEQIADNIIGVLFAAQDTTASVLTWVVKYLHDNQKVLEAVKVEQKAIEECINGGSRPMSWAQTRNMPFTNKVVLESLRMASIISFTFREAVADVEYNGYLIPKGWKVMPLFRNIHHNPDYFVDPHKFDPSRFEVAPRPNTFMPFGSGVHSCPGNELAKLEILIMIHHLVTKFRWELAGERDGIQHGPFPVPMDGLPIRVWRISN | 473 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 84360839 | 84365900 | + | Tan0012020.1 | Tan02g1829 | 744455 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan02g1829 | 473 | PRINTS | E-class P450 group I signature | 410 | 420 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | PRINTS | E-class P450 group I signature | 272 | 289 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | PRINTS | E-class P450 group I signature | 379 | 403 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | PRINTS | E-class P450 group I signature | 420 | 443 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | PRINTS | E-class P450 group I signature | 339 | 357 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | PANTHER | CYTOCHROME P450 26 | 35 | 447 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Tan02g1829 | 473 | SUPERFAMILY | Cytochrome P450 | 34 | 469 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | Gene3D | Cytochrome P450 | 25 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | CDD | CYP90-like | 65 | 468 | - | - | |
| Tan02g1829 | 473 | Pfam | Cytochrome P450 | 37 | 449 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | PRINTS | P450 superfamily signature | 411 | 420 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | PRINTS | P450 superfamily signature | 340 | 351 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | PRINTS | P450 superfamily signature | 420 | 431 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | PRINTS | P450 superfamily signature | 283 | 300 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1829 | 473 | FunFam | Abscisic acid 8 | 26 | 470 | - | - | |
| Tan02g1829 | 473 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 413 | 422 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g0911 | Tan-Chr2:10379204 | Tan02g1829 | Tan-Chr2:84360839 | 4.60E-164 | dispersed | |
| Tan02g1829 | Tan-Chr2:84360839 | Tan02g1831 | Tan-Chr2:84360839 | 3.20E-240 | dispersed | |
| Tan02g1829 | Tan-Chr2:84360839 | Tan02g1830 | Tan-Chr2:84360839 | 4.50E-210 | tandem | |
| Tan01g2414 | Tan-Chr1:29923666 | Tan02g1829 | Tan-Chr2:84360839 | 1.20E-151 | transposed | |
| Tan01g4795 | Tan-Chr1:113861907 | Tan02g1829 | Tan-Chr2:84360839 | 2.60E-189 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan02g1829 | K09843 | - | vvi:100245540 | 674.085 |