Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1830 ATGGCTCAAATTTTTTTACTCTTTCCCATCTTTCTTCTCCCTCTTCTTCTTCTTGTACCTCTAATTTTCTTTCATAACCAAAGGAACAAGCAAATTGCAAAGAAGCTCCCTCCTGGCTCAATGGGCTGGCCTCTAATTGGCGAGACCTTCCATTTCTACTCTCAACACCCCACCTCTTTCTTTTTTGGAAAGCAAAAAAGATATGGAGAGATATTCAAGACCCACATTCTTGGATGTCCGTGTGTGATGTTGGCGACTCCGGAGGCAGCTCGGTTAGTGCTAGTGACACATGCTCATCTGTTCAAGCCCACATACCCAGAAAGCAAAGAGCGTCTAATCGGACCATCGGCTCTGTTTTTCCACCAAAGTGAAACCCATTTGCGGCTGCGTAAGCTAATCCAAAGCTCACTCTCGCCGGAACCTGTTCGGAGCTTGGTCCCTGACATCCACTCCCTCGCCATCTCTGCATTGCCCTCATCCCTCCATGGCCATCTCATCAACACTTTCCATCAAATGAAGAAGTTCTCTTTTGAAGTCGGAATTTTGGCGATTTTTGGGCATTTGGAGGACGAAAATTACAGAGAAGAATTAATGAAGAACTATTCCATAGTGAACAAAGGCTATAATTCTTTTCCAACCAACATTCCCGGAACGGTTTACAAAAAAGCACTTAAAGCAAGAAAGAGGCTGGGAGAGATCATAAGCTGCATAATCTCAGAGAAAAAAGAGAAGGGAAAAGAATTGGTGGAGAAGAATTTATTGGGGAGTTTATTAAAATGGAGAGATGAAAAAGGAGAAAGTTTAAGTGATGAACAGATTGCTGACAATATAATTGGAGTTTTATTTGCTGCTCAGGACACCACGGCTAGTGTTCTGACATGGGTTGTTAAATATCTACATGACAACCAGAAAGTTCTAGAAGCTGTCAAGGTGGAGCAAAAGGCAATTGAAGAATGCATTAATGGGGGGAGCCGACCAATGAGTTGGGCTCAGACACGAAACATGCCGTTTACCAACAAGGTGGTGTTGGAGAGCTTGAGAATGGCGAGTATTATATCATTCACTTTTAGGGAAGCTGTGGCAGATGTTGAATACAATGGTTGCACCAAGACCCAATACATTCATGCCATTTGGCAGTGGGGTCCATTCCTGCCCTGGAAATGA 1164 43.56 MAQIFLLFPIFLLPLLLLVPLIFFHNQRNKQIAKKLPPGSMGWPLIGETFHFYSQHPTSFFFGKQKRYGEIFKTHILGCPCVMLATPEAARLVLVTHAHLFKPTYPESKERLIGPSALFFHQSETHLRLRKLIQSSLSPEPVRSLVPDIHSLAISALPSSLHGHLINTFHQMKKFSFEVGILAIFGHLEDENYREELMKNYSIVNKGYNSFPTNIPGTVYKKALKARKRLGEIISCIISEKKEKGKELVEKNLLGSLLKWRDEKGESLSDEQIADNIIGVLFAAQDTTASVLTWVVKYLHDNQKVLEAVKVEQKAIEECINGGSRPMSWAQTRNMPFTNKVVLESLRMASIISFTFREAVADVEYNGCTKTQYIHAIWQWGPFLPWK 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 84360839 84365900 + Tan0012020.2 Tan02g1830 744456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1830 387 PRINTS E-class P450 group IV signature 335 351 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1830 387 PRINTS E-class P450 group IV signature 59 82 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1830 387 PRINTS E-class P450 group IV signature 274 300 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1830 387 SUPERFAMILY Cytochrome P450 34 368 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1830 387 Gene3D Cytochrome P450 25 379 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1830 387 PANTHER CYTOCHROME P450 26 35 379 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Tan02g1830 387 Pfam Cytochrome P450 37 367 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0910 Tan-Chr2:10378617 Tan02g1830 Tan-Chr2:84360839 1.20E-128 dispersed
Tan02g1830 Tan-Chr2:84360839 Tan02g1833 Tan-Chr2:84360839 1.70E-210 dispersed
Tan02g1829 Tan-Chr2:84360839 Tan02g1830 Tan-Chr2:84360839 4.50E-210 tandem
Tan02g1830 Tan-Chr2:84360839 Tan02g1831 Tan-Chr2:84360839 1.70E-170 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1830 K09843 - vvi:100245540 486.108