Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan02g1831 | ATGATTATTAAGAGACACATTAATATATATTTTTCGATTAGATATGGAGAGATATTCAAGACCCACATTCTTGGATGTCCGTGTGTGATGTTGGCGACTCCGGAGGCAGCTCGGTTAGTGCTAGTGACACATGCTCATCTGTTCAAGCCCACATACCCAGAAAGCAAAGAGCGTCTAATCGGACCATCGGCTCTGTTTTTCCACCAAAGTGAAACCCATTTGCGGCTGCGTAAGCTAATCCAAAGCTCACTCTCGCCGGAACCTGTTCGGAGCTTGGTCCCTGACATCCACTCCCTCGCCATCTCTGCATTGCCCTCATCCCTCCATGGCCATCTCATCAACACTTTCCATCAAATGAAGAAGTTCTCTTTTGAAGTCGGAATTTTGGCGATTTTTGGGCATTTGGAGGACGAAAATTACAGAGAAGAATTAATGAAGAACTATTCCATAGTGAACAAAGGCTATAATTCTTTTCCAACCAACATTCCCGGAACGGTTTACAAAAAAGCACTTAAAGCAAGAAAGAGGCTGGGAGAGATCATAAGCTGCATAATCTCAGAGAAAAAAGAGAAGGGAAAAGAATTGGTGGAGAAGAATTTATTGGGGAGTTTATTAAAATGGAGAGATGAAAAAGGAGAAAGTTTAAGTGATGAACAGATTGCTGACAATATAATTGGAGTTTTATTTGCTGCTCAGGACACCACGGCTAGTGTTCTGACATGGGTTGTTAAATATCTACATGACAACCAGAAAGTTCTAGAAGCTGTCAAGGTGGAGCAAAAGGCAATTGAAGAATGCATTAATGGGGGGAGCCGACCAATGAGTTGGGCTCAGACACGAAACATGCCGTTTACCAACAAGGTGGTGTTGGAGAGCTTGAGAATGGCGAGTATTATATCATTCACTTTTAGGGAAGCTGTGGCAGATGTTGAATACAATGGATATTTAATTCCAAAGGGTTGGAAAGTAATGCCTTTATTCAGGAATATTCATCACAATCCTGACTACTTTGTTGACCCACACAAATTTGATCCTTCAAGATTTGAGGTTGCACCAAGACCCAATACATTCATGCCATTTGGCAGTGGGGTCCATTCCTGCCCTGGAAATGAGCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTGGTCACCAAATTCAGGTGGGAATTGGCAGGAGAGAGAGATGGGATTCAACATGGGCCATTTCCAGTGCCTATGGATGGGCTTCCAATCAGAGTCTGGAGAATATCCAATTGA | 1263 | 42.83 | MIIKRHINIYFSIRYGEIFKTHILGCPCVMLATPEAARLVLVTHAHLFKPTYPESKERLIGPSALFFHQSETHLRLRKLIQSSLSPEPVRSLVPDIHSLAISALPSSLHGHLINTFHQMKKFSFEVGILAIFGHLEDENYREELMKNYSIVNKGYNSFPTNIPGTVYKKALKARKRLGEIISCIISEKKEKGKELVEKNLLGSLLKWRDEKGESLSDEQIADNIIGVLFAAQDTTASVLTWVVKYLHDNQKVLEAVKVEQKAIEECINGGSRPMSWAQTRNMPFTNKVVLESLRMASIISFTFREAVADVEYNGYLIPKGWKVMPLFRNIHHNPDYFVDPHKFDPSRFEVAPRPNTFMPFGSGVHSCPGNELAKLEILIMIHHLVTKFRWELAGERDGIQHGPFPVPMDGLPIRVWRISN | 420 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 84360839 | 84365900 | + | Tan0012020.3 | Tan02g1831 | 744457 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan02g1831 | 420 | PANTHER | CYTOCHROME P450 26 | 13 | 394 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Tan02g1831 | 420 | Pfam | Cytochrome P450 | 11 | 396 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | Gene3D | Cytochrome P450 | 6 | 418 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | PRINTS | E-class P450 group I signature | 367 | 390 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | PRINTS | E-class P450 group I signature | 357 | 367 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | PRINTS | E-class P450 group I signature | 219 | 236 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | PRINTS | E-class P450 group I signature | 326 | 350 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | PRINTS | E-class P450 group I signature | 286 | 304 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | PRINTS | E-class P450 group I signature | 12 | 31 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | CDD | CYP90-like | 14 | 415 | - | - | |
| Tan02g1831 | 420 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 360 | 369 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan02g1831 | 420 | PRINTS | P450 superfamily signature | 230 | 247 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | PRINTS | P450 superfamily signature | 358 | 367 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | PRINTS | P450 superfamily signature | 287 | 298 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | PRINTS | P450 superfamily signature | 367 | 378 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1831 | 420 | FunFam | Abscisic acid 8 | 2 | 417 | - | - | |
| Tan02g1831 | 420 | SUPERFAMILY | Cytochrome P450 | 14 | 416 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g1829 | Tan-Chr2:84360839 | Tan02g1831 | Tan-Chr2:84360839 | 3.20E-240 | dispersed | |
| Tan02g1831 | Tan-Chr2:84360839 | Tan02g1834 | Tan-Chr2:84360839 | 4.10E-178 | dispersed | |
| Tan02g1830 | Tan-Chr2:84360839 | Tan02g1831 | Tan-Chr2:84360839 | 1.70E-170 | tandem | |
| Tan02g1831 | Tan-Chr2:84360839 | Tan02g1832 | Tan-Chr2:84360839 | 4.10E-178 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan02g1831 | K09843 | - | vvi:100245540 | 619.772 |