Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1831 ATGATTATTAAGAGACACATTAATATATATTTTTCGATTAGATATGGAGAGATATTCAAGACCCACATTCTTGGATGTCCGTGTGTGATGTTGGCGACTCCGGAGGCAGCTCGGTTAGTGCTAGTGACACATGCTCATCTGTTCAAGCCCACATACCCAGAAAGCAAAGAGCGTCTAATCGGACCATCGGCTCTGTTTTTCCACCAAAGTGAAACCCATTTGCGGCTGCGTAAGCTAATCCAAAGCTCACTCTCGCCGGAACCTGTTCGGAGCTTGGTCCCTGACATCCACTCCCTCGCCATCTCTGCATTGCCCTCATCCCTCCATGGCCATCTCATCAACACTTTCCATCAAATGAAGAAGTTCTCTTTTGAAGTCGGAATTTTGGCGATTTTTGGGCATTTGGAGGACGAAAATTACAGAGAAGAATTAATGAAGAACTATTCCATAGTGAACAAAGGCTATAATTCTTTTCCAACCAACATTCCCGGAACGGTTTACAAAAAAGCACTTAAAGCAAGAAAGAGGCTGGGAGAGATCATAAGCTGCATAATCTCAGAGAAAAAAGAGAAGGGAAAAGAATTGGTGGAGAAGAATTTATTGGGGAGTTTATTAAAATGGAGAGATGAAAAAGGAGAAAGTTTAAGTGATGAACAGATTGCTGACAATATAATTGGAGTTTTATTTGCTGCTCAGGACACCACGGCTAGTGTTCTGACATGGGTTGTTAAATATCTACATGACAACCAGAAAGTTCTAGAAGCTGTCAAGGTGGAGCAAAAGGCAATTGAAGAATGCATTAATGGGGGGAGCCGACCAATGAGTTGGGCTCAGACACGAAACATGCCGTTTACCAACAAGGTGGTGTTGGAGAGCTTGAGAATGGCGAGTATTATATCATTCACTTTTAGGGAAGCTGTGGCAGATGTTGAATACAATGGATATTTAATTCCAAAGGGTTGGAAAGTAATGCCTTTATTCAGGAATATTCATCACAATCCTGACTACTTTGTTGACCCACACAAATTTGATCCTTCAAGATTTGAGGTTGCACCAAGACCCAATACATTCATGCCATTTGGCAGTGGGGTCCATTCCTGCCCTGGAAATGAGCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTGGTCACCAAATTCAGGTGGGAATTGGCAGGAGAGAGAGATGGGATTCAACATGGGCCATTTCCAGTGCCTATGGATGGGCTTCCAATCAGAGTCTGGAGAATATCCAATTGA 1263 42.83 MIIKRHINIYFSIRYGEIFKTHILGCPCVMLATPEAARLVLVTHAHLFKPTYPESKERLIGPSALFFHQSETHLRLRKLIQSSLSPEPVRSLVPDIHSLAISALPSSLHGHLINTFHQMKKFSFEVGILAIFGHLEDENYREELMKNYSIVNKGYNSFPTNIPGTVYKKALKARKRLGEIISCIISEKKEKGKELVEKNLLGSLLKWRDEKGESLSDEQIADNIIGVLFAAQDTTASVLTWVVKYLHDNQKVLEAVKVEQKAIEECINGGSRPMSWAQTRNMPFTNKVVLESLRMASIISFTFREAVADVEYNGYLIPKGWKVMPLFRNIHHNPDYFVDPHKFDPSRFEVAPRPNTFMPFGSGVHSCPGNELAKLEILIMIHHLVTKFRWELAGERDGIQHGPFPVPMDGLPIRVWRISN 420
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 84360839 84365900 + Tan0012020.3 Tan02g1831 744457
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1831 420 PANTHER CYTOCHROME P450 26 13 394 - GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Tan02g1831 420 Pfam Cytochrome P450 11 396 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 Gene3D Cytochrome P450 6 418 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 PRINTS E-class P450 group I signature 367 390 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 PRINTS E-class P450 group I signature 357 367 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 PRINTS E-class P450 group I signature 219 236 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 PRINTS E-class P450 group I signature 326 350 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 PRINTS E-class P450 group I signature 286 304 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 PRINTS E-class P450 group I signature 12 31 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 CDD CYP90-like 14 415 - -
Tan02g1831 420 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 360 369 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Tan02g1831 420 PRINTS P450 superfamily signature 230 247 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 PRINTS P450 superfamily signature 358 367 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 PRINTS P450 superfamily signature 287 298 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 PRINTS P450 superfamily signature 367 378 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1831 420 FunFam Abscisic acid 8 2 417 - -
Tan02g1831 420 SUPERFAMILY Cytochrome P450 14 416 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1829 Tan-Chr2:84360839 Tan02g1831 Tan-Chr2:84360839 3.20E-240 dispersed
Tan02g1831 Tan-Chr2:84360839 Tan02g1834 Tan-Chr2:84360839 4.10E-178 dispersed
Tan02g1830 Tan-Chr2:84360839 Tan02g1831 Tan-Chr2:84360839 1.70E-170 tandem
Tan02g1831 Tan-Chr2:84360839 Tan02g1832 Tan-Chr2:84360839 4.10E-178 tandem
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1831 K09843 - vvi:100245540 619.772