Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1837 | ATGGCGGTTTCACTTTCAGCAGCCACTGCCAGAGCCTTCTATCTGCGGCTCTCATCTTCATCTTCATTTTACAGTCCCTCATTCAACCCTAAACACTCCCTCCAATCACCCTCCCGCCGCACAGTAATAGCTCAAGCCCAATCTCAGCCTCGCCAAACATGGCTCCCCGGCCTCGACCCTCCGCCGCATCTCGACGGAAGCCTCGCCGGAGATTTTGGATTCGATCCACTTGGGCTCGCCGAAGACCCACATAGCTTGAAGTGGTACGTCCAAGCAGAGCTCGTTCATTGTCGCTTCGCCATGCTTGGGGTCTCTGGAATTCTTCTCACAGATTTGCTTCGTGTAACAGGAATCAGTAAATTACCTGTTTGGTACAATGCGGGTGCTGTGGAATATGGCTTTGCCAACAAAGAAACCCTCTTCATTGTTCAGCTGCTGTTGATGGGGTTTGTGGAAACCAAAAGATATATGGATTTCAAAAGCCCTGGATCTCAAGCACAAGGAACTTTCTTTGGATTAGAATCCGCTTTCGAAGGTCTCGAGCCCGGATACCCTGGGGGTCCTCTGCTGAATCCTCTTGGCTTGGCTAAAGATATCAAGAATGCCCATGACTGGAAGCTCAAGGAGATTAAGAATGGGCGGCTTGCAATGGTAGCCATGCTGGGGATCTTTGTGCAAGCCTATGTGACACAAACAGGACCAATAGATAACCTTCTGGAGCACCTTTCAAATCCATGGCACAAGACTATTGTCCAGACCCTCTCGAACTCAAGTCCTTGA | 780 | 50.0 | MAVSLSAATARAFYLRLSSSSSFYSPSFNPKHSLQSPSRRTVIAQAQSQPRQTWLPGLDPPPHLDGSLAGDFGFDPLGLAEDPHSLKWYVQAELVHCRFAMLGVSGILLTDLLRVTGISKLPVWYNAGAVEYGFANKETLFIVQLLLMGFVETKRYMDFKSPGSQAQGTFFGLESAFEGLEPGYPGGPLLNPLGLAKDIKNAHDWKLKEIKNGRLAMVAMLGIFVQAYVTQTGPIDNLLEHLSNPWHKTIVQTLSNSSP | 259 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 84416418 | 84417732 | + | Tan0003940.1 | Tan02g1837 | 744463 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1837 | 259 | FunFam | Chlorophyll a-b binding protein, chloroplastic | 52 | 258 | - | - | |
Tan02g1837 | 259 | SUPERFAMILY | Chlorophyll a-b binding protein | 48 | 256 | - | - | |
Tan02g1837 | 259 | Gene3D | Chlorophyll a/b binding protein domain | 61 | 247 | - | - | |
Tan02g1837 | 259 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 36 | 250 | IPR001344 | GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro) | |
Tan02g1837 | 259 | Pfam | Chlorophyll A-B binding protein | 60 | 227 | IPR022796 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1837 | Tan-Chr2:84416418 | Tan09g2110 | Tan-Chr9:71467726 | 3.90E-54 | dispersed | |
Tan02g1837 | Tan-Chr2:84416418 | Tan05g2431 | Tan-Chr5:75463232 | 3.00E-54 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1837 | K08911 | - | csv:101219846 | 411.764 |