Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g1874 | ATGGGGATCGCTAATCTCTCATACGAGGAATGTCGTCGCAAGAGACTCGAAGAAAACAAGAAGCGAATGGAAGCCCTAAATTTGCCCTTGCTTTCTCAAGCTCTCCTCGATTCTTCCCCTTCCAAATCCTCACCTAGTAAGCTGTCCAAGCCTCGTGTGACGCAGAAACAACTCGTGGTGGTGAGGAGGTCCAGTCGCGTAGCGAAACAATCAGCCCCCGTTTACGCCGAAGTTGTTATCAATCGCGTGGTGATTCCTAGAAGGATTTCCAAAGCTAGAGATCTTTCAAACCGGGTTTATGCTTCGGATGAAGCAAGAAAAAATGCCTTTGAAAGAGCTGAGCAACTACAATCTGAGTTGGAGCCGACTTGTCCCAACTTTATAAAGTCAATGCTTCAGTCTCATATTAGTGGTGGATTCTGGCTGGGGCTTCCTTCTCATTTCTGCAAGAGGCACCTTCCTAATCGTGATGGAGTTATGACATTAATAGATGAAGATGGAGATAAGTATCCAACAATATATTTAGCACGAAAAACAGGACTTAGTGGCGGATGGAAGGGTTTTTCAGTTGCTCATAAATTGGCAGATGGGGATGCTGTGATTTTTCAATTCATTAAACCTACAATCTGCAAGGTGCACATCCTTAGAGCGAATGGTTCCAGAGAAGATAGTGATTCCAACAGTAGCTAA | 690 | 44.49 | MGIANLSYEECRRKRLEENKKRMEALNLPLLSQALLDSSPSKSSPSKLSKPRVTQKQLVVVRRSSRVAKQSAPVYAEVVINRVVIPRRISKARDLSNRVYASDEARKNAFERAEQLQSELEPTCPNFIKSMLQSHISGGFWLGLPSHFCKRHLPNRDGVMTLIDEDGDKYPTIYLARKTGLSGGWKGFSVAHKLADGDAVIFQFIKPTICKVHILRANGSREDSDSNSS | 229 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 86648614 | 86651082 | - | Tan0020046.1 | Tan02g1874 | 744500 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g1874 | 229 | ProSiteProfiles | B3 DNA-binding domain profile. | 127 | 218 | IPR003340 | GO:0003677(InterPro) | |
Tan02g1874 | 229 | Gene3D | - | 101 | 219 | IPR015300 | - | |
Tan02g1874 | 229 | Coils | Coil | 6 | 26 | - | - | |
Tan02g1874 | 229 | SMART | B3_2 | 127 | 218 | IPR003340 | GO:0003677(InterPro) | |
Tan02g1874 | 229 | PANTHER | B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED | 12 | 218 | IPR044837 | - | |
Tan02g1874 | 229 | CDD | B3_DNA | 125 | 216 | IPR003340 | GO:0003677(InterPro) | |
Tan02g1874 | 229 | SUPERFAMILY | DNA-binding pseudobarrel domain | 120 | 219 | IPR015300 | - | |
Tan02g1874 | 229 | Pfam | B3 DNA binding domain | 127 | 217 | IPR003340 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g1874 | Tan-Chr2:86648614 | Tan07g1114 | Tan-Chr7:36963388 | 3.20E-28 | dispersed | |
Tan02g1874 | Tan-Chr2:86648614 | Tan02g1875 | Tan-Chr2:86676725 | 2.00E-102 | tandem | |
Tan06g2280 | Tan-Chr6:73766644 | Tan02g1874 | Tan-Chr2:86648614 | 1.80E-14 | transposed | |
Tan02g0900 | Tan-Chr2:10265319 | Tan02g1874 | Tan-Chr2:86648614 | 1.60E-56 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26785 | PF02362 | B3 | 2.80E-12 | CL0405 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g1874 | - | - | - | 0.0 |