Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1876 ATGGAGATCGATGATTTGGACGACGAAGAGTTGGCATTTTCGAGGAACTATTTTCTGGCTAAGGAATTGGGCGGTTCGAATAAGAAATCTTCTCGGAAACTCGCCGACATCGACGTCGTCGACGAACAGGAATTGAGGGCGGCGGCGGCGAAAATTGAGCCTAAACATGAGAAAGAGATTGCGGCTTTGATATCCAGCTACAAAAGTTTGTACTCCAAATGGGTTTTTGAGCTCAGATTCGGTTTTGGGCTTCTAATGTATGGATTTGGGTCGAAGAAGGCCTTGATTGAAGATTTTGCTTCCACAGCATTGACGGATTATTCTGTTATAGTTGTCAATGGCTATCTTCAATCAGTCAATATTAAACAGGTTGTAGTAGCCATAGCTGAAGTATTGTCGGATCAGTTGAAATCCCGACCGAGAAATGCATCAGGAGGGGGCACGCCTAAAGTTCATCAGTCCTTTACTTCGCGATCCATGGATGATCTGTTTACATTTTTGAATGGATCAAATGAGGAAGACAAGGATTGTTTTGTTTGCGTTGTGATACACAACATTGATGGACCTGGGTTAAGAGATTCTGAAACACAAGAGTTTCTTGCAAGAGTTGCTGCTTGTTCCCATGTTCGAATTATTGCCTCCGTTGATCACGTGAATGCACCTCTTTTATGGGACAAGAAGATGGTTCACACACAATTTAACTGGTTATGGTATCATGTTCCAACATTTGCCCCTTACAAGATTGAAGGAATGTTCTTCCCTTTGATTCTTGCACATGGTGGTACCGCTCAAAGTGCAAAAACTGCTACAATAGTTTTACAGAGTTTGACACCGAATGCACAAAGTGTTTTTAAAGTTCTTATAGAACATCAGCTAGCTCATCCTGATGAAGAAGGTATGCCAATCAATAACTTGTATGCAATTTGTCGAGAGCGCTTCCTAGTCAGCAGCCAGGTAACACTGAACTCCCATTTGACCGAATTTAAGGACCATGAGTTGGTGAAGATCAGAAGGCATTCTGATGGTCAAGATTGCTTGTATATACCTCTTCCATCTGAAGCGCTTGAAAAACTATTAATGGAGTTGAGATAA 1092 41.85 MEIDDLDDEELAFSRNYFLAKELGGSNKKSSRKLADIDVVDEQELRAAAAKIEPKHEKEIAALISSYKSLYSKWVFELRFGFGLLMYGFGSKKALIEDFASTALTDYSVIVVNGYLQSVNIKQVVVAIAEVLSDQLKSRPRNASGGGTPKVHQSFTSRSMDDLFTFLNGSNEEDKDCFVCVVIHNIDGPGLRDSETQEFLARVAACSHVRIIASVDHVNAPLLWDKKMVHTQFNWLWYHVPTFAPYKIEGMFFPLILAHGGTAQSAKTATIVLQSLTPNAQSVFKVLIEHQLAHPDEEGMPINNLYAICRERFLVSSQVTLNSHLTEFKDHELVKIRRHSDGQDCLYIPLPSEALEKLLMELR 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 86711941 86714311 - Tan0002555.1 Tan02g1876 744502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1876 363 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 2 15 361 IPR007220 GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro)
Tan02g1876 363 Pfam Origin recognition complex subunit 2 30 353 IPR007220 GO:0000808(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1876 Tan-Chr2:86711941 Tan02g1877 Tan-Chr2:86711941 1.30E-159 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1876 K02604 - csv:101204992 664.455