Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan02g1877 | ATGTATGGATTTGGGTCGAAGAAGGCCTTGATTGAAGATTTTGCTTCCACAGCATTGACGGATTATTCTGTTATAGTTGTCAATGGCTATCTTCAATCAGTCAATATTAAACAGGTTGTAGTAGCCATAGCTGAAGTATTGTCGGATCAGTTGAAATCCCGACCGAGAAATGCATCAGGAGGGGGCACGCCTAAAGTTCATCAGTCCTTTACTTCGCGATCCATGGATGATCTGTTTACATTTTTGAATGGATCAAATGAGGAAGACAAGGATTGTTTTGTTTGCGTTGTGATACACAACATTGATGGACCTGGGTTAAGAGATTCTGAAACACAAGAGTTTCTTGCAAGAGTTGCTGCTTGTTCCCATGTTCGAATTATTGCCTCCGTTGATCACGTGAATGCACCTCTTTTATGGGACAAGAAGATGGTTCACACACAATTTAACTGGTTATGGTATCATGTTCCAACATTTGCCCCTTACAAGATTGAAGGAATGTTCTTCCCTTTGATTCTTGCACATGGTGGTACCGCTCAAAGTGCAAAAACTGCTACAATAGTTTTACAGAGTTTGACACCGAATGCACAAAGTGTTTTTAAAGTTCTTATAGAACATCAGCTAGCTCATCCTGATGAAGAAGGTATGCCAATCAATAACTTGTATGCAATTTGTCGAGAGCGCTTCCTAGTCAGCAGCCAGGTAACACTGAACTCCCATTTGACCGAATTTAAGGACCATGAGTTGGTGAAGATCAGAAGGCATTCTGATGGTCAAGATTGCTTGTATATACCTCTTCCATCTGAAGCGCTTGAAAAACTATTAATGGAGTTGAGATAA | 837 | 40.5 | MYGFGSKKALIEDFASTALTDYSVIVVNGYLQSVNIKQVVVAIAEVLSDQLKSRPRNASGGGTPKVHQSFTSRSMDDLFTFLNGSNEEDKDCFVCVVIHNIDGPGLRDSETQEFLARVAACSHVRIIASVDHVNAPLLWDKKMVHTQFNWLWYHVPTFAPYKIEGMFFPLILAHGGTAQSAKTATIVLQSLTPNAQSVFKVLIEHQLAHPDEEGMPINNLYAICRERFLVSSQVTLNSHLTEFKDHELVKIRRHSDGQDCLYIPLPSEALEKLLMELR | 278 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 86711941 | 86714311 | - | Tan0002555.2 | Tan02g1877 | 744503 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan02g1877 | 278 | Pfam | Origin recognition complex subunit 2 | 1 | 268 | IPR007220 | GO:0000808(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro) | |
| Tan02g1877 | 278 | PANTHER | ORIGIN RECOGNITION COMPLEX SUBUNIT 2 | 1 | 276 | IPR007220 | GO:0000808(InterPro)|GO:0003688(PANTHER)|GO:0005634(InterPro)|GO:0005664(PANTHER)|GO:0006260(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g1876 | Tan-Chr2:86711941 | Tan02g1877 | Tan-Chr2:86711941 | 1.30E-159 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan02g1877 | K02604 | - | csv:101204992 | 519.62 |