Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1912 ATGTTTAGCTCCTCCCGTATGTTGCCGGACCTCTCCTTGCAGATAAGTCCGCCGTCTGATTCCGGCAGCAGCGGCAGCGATCTCACCCATGACAATGCTGCTCCTGCTACTGCTACTGCTGCTGGGTTTTTTCTTCCGGCTAAACCCCATATGGCCGGTTTAGCCATCGAGCTTGAAAAAAGCTTCAACAATAATGGCCGCCATTTTAACGAACACCAACCTCAAATCTATGGCCGCCATTTTAAGAGAGGTGCAAAAATGGGGTTTGGAATTAAAAGAAGCATTAGAGCTCCAAGAATGAGATGGACTACAACTCTTCATGCTCATTTTGTCCACGCTGTTCAGCTCCTTGGCGGCCATGAAAGGGCAACTCCAAAATCTGTATTGGAGCTGATGAATGTCAAAGATCTAACCCTAGCTCATGTAAAGAGCCATTTGCAGATGTATAGAACTGTGAAAAGCACTGACAAATCAACTGACTCAGCCTTGAAGAACCAATTAAGGCCAGAAGTTGATGCCAATGGTGTTTCAAATTGTGAGATCTCTAACCCAAAACTTGCAATATGGAAAAGTCCTGATCAAATGAACTTGTTCTGTTCATCAATGGAGACAAATCAAGAGATGACGACCAGATGGAGTCAACATTGCAACAATAATATTGGAAAAAATCAGCAGGAGCTGGACCGACATCATGCAAGCATCAAAATCTCGAGTGGCGTGAAGAAGCAGAGGTTGGAAGGTAGCTGCTTGTCGTTGTGTGATCATCATGGCGATGTGTATAATAATAATAATAATAATAATCTTAATTTAGATTTCACTCTCGGATGCCCTAATTCACTAACAATCGAGTCTAATTCTCACTCTTCAGCTTCAGAACTTCCCCTTCTGAAATGCTAA 897 43.14 MFSSSRMLPDLSLQISPPSDSGSSGSDLTHDNAAPATATAAGFFLPAKPHMAGLAIELEKSFNNNGRHFNEHQPQIYGRHFKRGAKMGFGIKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKSTDSALKNQLRPEVDANGVSNCEISNPKLAIWKSPDQMNLFCSSMETNQEMTTRWSQHCNNNIGKNQQELDRHHASIKISSGVKKQRLEGSCLSLCDHHGDVYNNNNNNNLNLDFTLGCPNSLTIESNSHSSASELPLLKC 298
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 87549699 87552097 + Tan0003769.1 Tan02g1912 744538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1912 298 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 3 278 IPR044847 GO:0000976(InterPro)|GO:0000976(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0006355(InterPro)|GO:0010158(InterPro)
Tan02g1912 298 FunFam Myb family transcription factor 96 154 - -
Tan02g1912 298 MobiDBLite consensus disorder prediction 1 32 - -
Tan02g1912 298 Gene3D - 97 154 - -
Tan02g1912 298 NCBIfam myb-like DNA-binding domain, SHAQKYF class 98 151 IPR006447 GO:0003677(InterPro)
Tan02g1912 298 SUPERFAMILY Homeodomain-like 95 152 IPR009057 -
Tan02g1912 298 Pfam Myb-like DNA-binding domain 99 150 IPR001005 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1912 Tan-Chr2:87549699 Tan07g2007 Tan-Chr7:71775286 6.90E-31 dispersed
Tan01g4854 Tan-Chr1:114254903 Tan02g1912 Tan-Chr2:87549699 1.80E-36 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26791 PF00249 Myb_DNA-binding 1.20E-05 CL0123 Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1912 - - - 0.0