Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1916 ATGTCGGTAACCTCCATAAACATCCCTTCTCTTCAACCCCAGTTGCGATTCCCGTCGCAGAAAACGTCGGCGAGACCTCCTTCTAAGGTTGGGTTTGTTTCCGTACGCCCGATCTATGCCGTCGAGCAGTCGTCCTCGTACGTTCAAGCGCCGCAGCGGACTGTTTCGCCGCCGGAACCGGCGAAGCTTCCGCTGAGGAAGATTCCCGGCGACTATGGTCCGCCCGTGTTCGGGCCGTTGAAGGACCGACAAGACTATTTTTACAATCAGGGGAAAGAAGAGTTTTTGAAATCTCGAATGCTTCGGTACGAATCGACTGTTTACAGAACCAATATGCCACCGGGTCCGCTTATCTCTTCCGATTCTCGAGTTATTGTTTTACTCGACGGCAAGAGTTTCCCTGTTCTCTTTGACAGTTCTAAAGTTGAGAAGAAGGATGTCTTCACCGGGACGTACATGCCTTTAACAGAACTCACCGGTGGCTACCGGGTTCTGTCTTATATTGACCCATCGGAGCCCGATCACGAGAAGCTTAAGCAACTGATCTTCTTCCTCCTCAAGCACCGCCGGGATAAAATTCTACCGGAATTTCATTCTACTTTTTCGGAGCTTTTCCAGACTCTGGAGAAGGATTTGGCCACCGCCGGTAGGGCAGAGTACAATGCTCCCGGTGAACAGGCGGCGTTTAATTTCTTGGCTCGGTCTCTCTTCGGTGCTAATCCGGTGGATACCAAATTGGGCCAAGACGCTCCCAAATTGATTTCGAAATGGGTTCTGTTCCAGCTTGGCCCTGTTCTCAGACTCGGCCTCCCCAAGCTCGTCGAGGAGCTCCTCCTCCGCACGGTCAGGCTCCCGCCGGCGCTGATTAAAGCCGATTACCAGCGGCTGTACGACTTCTTTTACCAGTCGTCGGAGGCGGTGTTTGCAGAGGCGGACAAATTGGGGATTTCGAGGGAAGAAGCTTGTCATAACTTGCTCTTCACCACTTGCTTCAATTCGTTCGGAGGGATGAAGATCTTCTTCCCCAATATGATCAAATGGATCGGTCGCGCCGGAACAAATCTCCACACCCAACTCGCACGGGAGATTCGAACAGCCGTGAAAGCCCACGGCGGAAAAATCACGATGGGGGCTATGGAACAGATGCCACTGATGAAATCGGTCGTGTACGAAGCGTTCAGAATCGAGCCGCCGGTTCCGGTTCAGTACGGTCGGGCGAAGAAGGATCTCGTGATCGAAAGCCACGATGCGGCTTTCGAGATCAAAGAAGGGGAAATGATTTGTGGGTACCAGCCATTTGCGACCAGAGATCCGAAAATCTTCGATAGAGCCGACGAATTCGTGCCAGATCGGTTCACCGGCGACGGCGAAGAGTTGTTGCAACACGTGCTCTGGTCAAACGGACCGGAGACTCAGTCGCCGTCGGTTCAGAACAAGCAGTGCGCCGGAAAGGACTTCATCGTCTTCATTTCTCGCCTTCTCGTCGTCGAATTCTTCCTCCGATACGATTCATTCGACATTGAAGTCACACCCTCGCCGTTGGGCGCCGCCGTCACGGTAACTTCCCTGAAGAAAGCAAGCTTTTGA 1587 52.87 MSVTSINIPSLQPQLRFPSQKTSARPPSKVGFVSVRPIYAVEQSSSYVQAPQRTVSPPEPAKLPLRKIPGDYGPPVFGPLKDRQDYFYNQGKEEFLKSRMLRYESTVYRTNMPPGPLISSDSRVIVLLDGKSFPVLFDSSKVEKKDVFTGTYMPLTELTGGYRVLSYIDPSEPDHEKLKQLIFFLLKHRRDKILPEFHSTFSELFQTLEKDLATAGRAEYNAPGEQAAFNFLARSLFGANPVDTKLGQDAPKLISKWVLFQLGPVLRLGLPKLVEELLLRTVRLPPALIKADYQRLYDFFYQSSEAVFAEADKLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGTNLHTQLAREIRTAVKAHGGKITMGAMEQMPLMKSVVYEAFRIEPPVPVQYGRAKKDLVIESHDAAFEIKEGEMICGYQPFATRDPKIFDRADEFVPDRFTGDGEELLQHVLWSNGPETQSPSVQNKQCAGKDFIVFISRLLVVEFFLRYDSFDIEVTPSPLGAAVTVTSLKKASF 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 87658440 87660464 - Tan0013036.1 Tan02g1916 744542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1916 528 PANTHER CYTOCHROME P450 26 67 502 - GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
Tan02g1916 528 SUPERFAMILY Cytochrome P450 64 503 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1916 528 Gene3D Cytochrome P450 59 528 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1916 528 PRINTS E-class P450 group IV signature 481 499 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1916 528 PRINTS E-class P450 group IV signature 435 453 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1916 528 PRINTS E-class P450 group IV signature 382 398 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1916 528 FunFam Allene oxide synthase, chloroplastic 63 528 - -
Tan02g1916 528 Pfam Cytochrome P450 357 455 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Tan02g1916 528 CDD CYP74 97 521 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0369 Tan-Chr2:3134343 Tan02g1916 Tan-Chr2:87658440 1.00E-106 transposed
Tan05g0493 Tan-Chr5:3378202 Tan02g1916 Tan-Chr2:87658440 4.90E-27 transposed
Tan02g0854 Tan-Chr2:9374226 Tan02g1916 Tan-Chr2:87658440 4.10E-148 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1916 K01723 - csv:101221732 931.013