Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1917 ATGGCATCCACTAGATCGTTCCGGCCGGTAAAGCCTTCAGCCGCCGTCGTGTCTTCCTCTTCTTCTTCTTCATCCGCGTCGTCGGCGGCGACTGTGAGGTGTTTGAGCAAAACGGGGTTAAATTCAAACAACGGCGAATGGTCAATAACTTCCGGCGACGTCGAGAGAAGGCAGATGGTCGCCCTGAAGGCGGCGGTGGCGGCGGCTCCCGAGACTGTGGAAATTAAAACCAGAGAACTCGATTTGGGTTCTTTGCTGGCGAATCTGTTCGTTCAATTGAAGACCGCTGTGGTGAAAACGAAGATTCGGAGGCTACAGATTCAGAAGTTCATCGAAAAGATCATAATCGACTGCCGATTCTTCACATTGTTCGCCGTCGCCGGATCTTTATTGGGTTCGATCCTCTGTTACGTGGAGGGGAGCTTTATCGTTGCAGAGTCATATCTGCAGTATTTCAATGGTCTTTCGCAGAGGTCGGATCAAACTCATACGGTGGAGCTTTTAATTGAAGCGTTAGATATGTTCCTCGTCGGAACTGCTCTGGTTGTTTTTGGGATCGGATTGTTCGCAATGTTCGTCGGATCGGAGAAGATGAAGGAAAAAAACCGGCGTTTGATTTCTGGGTCGAATTTGTTTGGTCTGTTCTACATGAAGAAAATTCCGACGTGGGTGGCAATGGAATCGGTGTCGGAGGCGAAGTCGAAGATCGGACATGCGGTGATGATGATACTGCAAGTGGGTGTGTTAGAGAAGTTCAAGAGTATTCCTTTGACCTCTGCCGCCGATCTCGCGTGTTTTGCCGCCGCCGTTCTGATTTCCTCCGCTTCCATCTTCTTCCTCTCCAGACTTAACGTGAGCGGCGGAGGCGGTTACAAGTGA 879 50.28 MASTRSFRPVKPSAAVVSSSSSSSSASSAATVRCLSKTGLNSNNGEWSITSGDVERRQMVALKAAVAAAPETVEIKTRELDLGSLLANLFVQLKTAVVKTKIRRLQIQKFIEKIIIDCRFFTLFAVAGSLLGSILCYVEGSFIVAESYLQYFNGLSQRSDQTHTVELLIEALDMFLVGTALVVFGIGLFAMFVGSEKMKEKNRRLISGSNLFGLFYMKKIPTWVAMESVSEAKSKIGHAVMMILQVGVLEKFKSIPLTSAADLACFAAAVLISSASIFFLSRLNVSGGGGYK 292
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 87698192 87699749 + Tan0001428.1 Tan02g1917 744543

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1917 292 PANTHER OS06G0710300 PROTEIN 26 285 - -
Tan02g1917 292 Pfam Uncharacterized protein family, UPF0114 115 252 IPR005134 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1917 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1917 Tan-Chr2:87698192 Tan04g2395 Tan-Chr4:82731028 3.70E-29 dispersed
Tan02g1917 Tan-Chr2:87698192 Tan02g1918 Tan-Chr2:87698192 4.20E-105 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi18g866 Blo01g01547 . . . Bpe02g00410 . . . . . . . . Car12g00470 Sed10g1307 . Cpe07g00448 Bhi04g00291 Tan02g1917 Cmetu03g1977 . Hepe10g0682 . Lcy13g2016 . . . . . . . Cone4ag1884 Cone7ag1792 . . . . . Cme03g01989 . . . . . . . . . . . Cma12g00500 . . . . . . . . . . . . . . . . . . . . Csa02g02016 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0013499 1 1 1 0 1 1 1 1 0 0 0 1 0 1 1 0 1 2 1 1 1 1 1 1 1 0 1 2 2 1 26