Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g1938 ATGACCTCCGACGGGGCCACTTCTGCCTCCACTTGCCGCCGGAAGCCTTCCTGGAGGGAGCGCGAGAACAATCGTACCAGAGAGCGGCGGAGGAGAGCCATCGCAGCTAAGATTTACTCCGGCCTTAGGGCTCAGGGCAACTTCAATTTGCCTAAACATTGTGACAATAACGAGGTCCTTAAAGCCCTCTGTGTTGAAGCTGGTTGGACCGTCGAAGATGACGGAACCACTTATCGGAAGGGATGCAAGCCGCCCCCAATTGACATTGTTGGCACTTCCACCAAAATCACTCCCTACTCTTCCCAAAATCCAAGCCCATTGTCTTCTTCATTCCCTAGCCCTATGGCATCCTATCAAGTCAGCCCCTCCTCCTCCTCCTTCCCGAGCCCGTCCCGTTTCGATGCCAACAATCCATCGAATCTCATTCCGTATCTTCGCCAAGCGATTCCCATATCACTTCCTCCTCTTAGAATCTCAAACAGTGCTCCTGTGACCCCTCCCCTTTCATCCCCAGCCTCAAGGACTCCACAGCCATTCCCCAATTGGGAGGGCACTGCTAAAGAATCCTTGTCCTCCTTGAATTATCCTTTCTTTGCAGTATCTGCCCCGGCTAGCCCAACTCGCCCTCAGCTGCATACTCCCGCCACAATTCACGAATGTGACGAATCCGAATCATCCACCAACGATTCCAGTCAATGGGCACTTCTCCGTGCCTATGCACCTTCTGCATTGACAATGCCAACATCTCCCACATTCAACCTTGTGAAGCCTGCTGACCAGCACGTTCTGCATGGTGGTTTCATCAAAGAAAATGGAATAGGAAACGAATTCGAGTTCTTGGGTTGCAAGGTTAAGCCCTGGGAAGGGGAGAAGATCCACGAAGTCGGATTGGAGGATTTAGAGCTCACACTCGGCAGCAGTAAGGCTCGAAGCTAA 936 52.24 MTSDGATSASTCRRKPSWRERENNRTRERRRRAIAAKIYSGLRAQGNFNLPKHCDNNEVLKALCVEAGWTVEDDGTTYRKGCKPPPIDIVGTSTKITPYSSQNPSPLSSSFPSPMASYQVSPSSSSFPSPSRFDANNPSNLIPYLRQAIPISLPPLRISNSAPVTPPLSSPASRTPQPFPNWEGTAKESLSSLNYPFFAVSAPASPTRPQLHTPATIHECDESESSTNDSSQWALLRAYAPSALTMPTSPTFNLVKPADQHVLHGGFIKENGIGNEFEFLGCKVKPWEGEKIHEVGLEDLELTLGSSKARS 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 87961930 87963847 + Tan0004807.1 Tan02g1938 744564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g1938 311 MobiDBLite consensus disorder prediction 93 132 - -
Tan02g1938 311 MobiDBLite consensus disorder prediction 14 30 - -
Tan02g1938 311 Pfam BES1/BZR1 plant transcription factor, N-terminal 13 136 IPR008540 -
Tan02g1938 311 MobiDBLite consensus disorder prediction 1 30 - -
Tan02g1938 311 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 12 257 IPR033264 GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0009742(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g1938 Tan-Chr2:87961930 Tan03g1950 Tan-Chr3:74643878 1.60E-86 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
26796 PF05687 BES1_N 4.20E-62 No_clan Tan TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g1938 K14503 - csv:101219853 530.406