Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Tan02g1989 | ATGCCCTCACTCTGCTTTTTGTGTTTTGCCGCTCTCGCAGCCCTCTCGATCCTCGTCGTTTTCCGATTATCTGTTAAGAGTACAGGGCGGCGGCGGCGGCCGAATTCTGATTCTCCTCCCCCTGGAAGCAGAGGATTGCCTCTGATCGGAGAGACGATCCAGTTCATGGCCGCCGTTAATAGCAGCAACGGCGTTTATGAGTTCGTCAGAATCCGCTGCCTCCGATATGGACGATGCTTTAAGACTCGGATATTTGGGGAAACGCACGTGTTCGTTTCGAGCACCGAATCGGCGAAGCTGATACTCAACGACGGCGGAGGCAGCTTCACCAAGAAATACATAAGATCCATCGCCGATCTCGTCGGCCACCGGAGTTTGCTCTGTGCGTCGCATCTGCACCATAAATTCCTACGCCGCCGTCTCATCAATCTGTTCTCCCCCACTTTTCTGGCTTCCTTCGTCACGCAGTTCGATCAACAGATCGTTGACGCGCTTCGAACCTGGGAAACCGGATCCACCATTGTCGTCCTCAACGAAGCCCTCAAGATAACATGCAAAGCGATGTGCAAGATGCTAATGAGCATAGAAAACGAAGACGAATTAGAGCTATTACAGGAGGAGGTAGCTCATGTTTGTGAAGCTATGCTTGCATTCCCATGGCGGTTTCCGGGGACAAGATTCCACAACGGCCTCAAGGCAAGAAGAAGAATCATAAAGGTACTCGAAAAAGAGATTCGAGAGAGACGGGGATCGGAAGCTCGACGTGAGGATTTCCTGCAGCGACTGTTGACGGAGGAGGGCGACGACAGCGGAGGAGCGTTGTCGGATGAAGAGATCGTAGATAATATACTGACTATGTTGATCGCAGGGCAGGATACGACTGCGAGTGCCATCACTTGGATGGTCAAGTTCTTGGATGAGAACCAGGATGTTCTTCAACGTTTAAAGGATGAACAATTTGAGATATTATTGAGCAAACAAAAAGAACATGGGAGTTGTTTCCTTACGTTGGAAGATCTTGGCAACATGTCTTATGCTGCTAAGGTAGTAAAAGAATCCTTGAGGTTAGCATCGGTGGTGCCATGGTTCCCAAGGCTAGTCCTCCAAGACTCTGAAATTCAAGGTTACAAAATCAAGAAAGATTGGAGTGTTAACATTGATGTTAGGTCACTCCATTCAGATCCTTCCATCTACAATCATCCTACCAACTTCAATCCTTCAAGATTTGATGAAGATGCAAAGCCCTATAGTTTTCTAGCTTTTGGAATGGGAGGGAGGCAATGTCTTGGAATGAATCTCGCCAAAGCCATGATGCTAGTCTTTCTTCACCGCTTGGTGACTTCTTACAGATGGAAGGTGATGGACTCCGACCCTAGCATTGAGAAGTGGGCACTCTTTTCAAAACTAAAGAGTGGTTGTCCGATTATTGTCACACATATTTGA | 1443 | 48.02 | MPSLCFLCFAALAALSILVVFRLSVKSTGRRRRPNSDSPPPGSRGLPLIGETIQFMAAVNSSNGVYEFVRIRCLRYGRCFKTRIFGETHVFVSSTESAKLILNDGGGSFTKKYIRSIADLVGHRSLLCASHLHHKFLRRRLINLFSPTFLASFVTQFDQQIVDALRTWETGSTIVVLNEALKITCKAMCKMLMSIENEDELELLQEEVAHVCEAMLAFPWRFPGTRFHNGLKARRRIIKVLEKEIRERRGSEARREDFLQRLLTEEGDDSGGALSDEEIVDNILTMLIAGQDTTASAITWMVKFLDENQDVLQRLKDEQFEILLSKQKEHGSCFLTLEDLGNMSYAAKVVKESLRLASVVPWFPRLVLQDSEIQGYKIKKDWSVNIDVRSLHSDPSIYNHPTNFNPSRFDEDAKPYSFLAFGMGGRQCLGMNLAKAMMLVFLHRLVTSYRWKVMDSDPSIEKWALFSKLKSGCPIIVTHI | 480 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 88851645 | 88865759 | - | Tan0008522.1 | Tan02g1989 | 744615 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Tan02g1989 | 480 | PANTHER | CYTOCHROME P450 26 | 40 | 449 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| Tan02g1989 | 480 | Gene3D | Cytochrome P450 | 30 | 479 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 421 | 430 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Tan02g1989 | 480 | Pfam | Cytochrome P450 | 40 | 462 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | PRINTS | E-class P450 group I signature | 387 | 411 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | PRINTS | E-class P450 group I signature | 278 | 295 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | PRINTS | E-class P450 group I signature | 298 | 324 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | PRINTS | E-class P450 group I signature | 347 | 365 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | PRINTS | E-class P450 group I signature | 428 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | PRINTS | E-class P450 group I signature | 418 | 428 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | PRINTS | P450 superfamily signature | 289 | 306 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | PRINTS | P450 superfamily signature | 419 | 428 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | PRINTS | P450 superfamily signature | 428 | 439 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | PRINTS | P450 superfamily signature | 348 | 359 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | SUPERFAMILY | Cytochrome P450 | 35 | 478 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Tan02g1989 | 480 | CDD | CYP90-like | 72 | 479 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Tan02g1989 | Tan-Chr2:88851645 | Tan04g0177 | Tan-Chr4:1380257 | 3.60E-53 | dispersed | |
| Tan01g1451 | Tan-Chr1:14615191 | Tan02g1989 | Tan-Chr2:88851645 | 6.00E-24 | transposed | |
| Tan01g3346 | Tan-Chr1:91846353 | Tan02g1989 | Tan-Chr2:88851645 | 2.20E-84 | transposed | |
| Tan02g1989 | Tan-Chr2:88851645 | Tan03g2013 | Tan-Chr3:75184353 | 1.30E-116 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Tan02g1989 | - | - | - | 0.0 |