Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tan02g2020 | ATGTTGAAATCAGGAGCCAAGCAGCAGCAGGTCAAAAGGGCCTCTTCTTCTCCTTCTTCTTCTTCTTCGCAAGGCAGCTCGAGAAAAGGCTGTATGAGAGGCAAAGGAGGCCCTGAAAATGCTTCCTGCACTTACAAAGGCGTCCGCCAAAGGACTTGGGGTAAATGGGTTGCTGAGATTCGTGAGCCTAATCGTGGGGCTCGTCTCTGGCTTGGCACTTTTGACACCTCTCATGATGCTGCCATCGCTTATGACAATGCTGCTCGTCGTCTCTATGGCTCTGACGCTAAGCTCAATCTCCCTTCCTCTGTTTCTTTTTCTTCTTCTTCTTCTTCTTCTTCCTCTGTTTCTTCCTCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCTCTGCTCCTCCTGCTCCTCCTCCCATGGTGGAAACCACTGCTGCACCACTCCCTGAAGAGAAGTCTGTGCAAAACAATGGCGGGATGGGATTTGGGGACGACCAAATTGGGGGGCTTTGGAGGTCTATGAGTATTAGCTTAGATGATTCTATTTGGGTTGAGGCAGCCATGTCTTTGGATTTTCCTGTCATGGAGGATCAGTCCATTTTTGCTGCTAATTTGGTCGATGCAAATGGATGGGATACACTGCAATGGTGTTAA | 654 | 48.32 | MLKSGAKQQQVKRASSSPSSSSSQGSSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFDTSHDAAIAYDNAARRLYGSDAKLNLPSSVSFSSSSSSSSSVSSSASSSSSSSSSSSSAPPAPPPMVETTAAPLPEEKSVQNNGGMGFGDDQIGGLWRSMSISLDDSIWVEAAMSLDFPVMEDQSIFAANLVDANGWDTLQWC | 217 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 89445874 | 89446949 | + | Tan0009322.1 | Tan02g2020 | 744646 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tan02g2020 | 217 | ProSiteProfiles | AP2/ERF domain profile. | 44 | 101 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2020 | 217 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 9 | 141 | - | GO:0000976(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006950(PANTHER)|GO:0045893(PANTHER) | |
Tan02g2020 | 217 | Pfam | AP2 domain | 45 | 93 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2020 | 217 | MobiDBLite | consensus disorder prediction | 103 | 131 | - | - | |
Tan02g2020 | 217 | FunFam | Ethylene-responsive transcription factor 2 | 43 | 102 | - | - | |
Tan02g2020 | 217 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
Tan02g2020 | 217 | CDD | AP2 | 43 | 99 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2020 | 217 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Tan02g2020 | 217 | PRINTS | Ethylene responsive element binding protein signature | 67 | 83 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2020 | 217 | PRINTS | Ethylene responsive element binding protein signature | 45 | 56 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2020 | 217 | SMART | rav1_2 | 44 | 107 | IPR001471 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2020 | 217 | Gene3D | AP2/ERF domain | 44 | 103 | IPR036955 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Tan02g2020 | 217 | MobiDBLite | consensus disorder prediction | 103 | 144 | - | - | |
Tan02g2020 | 217 | SUPERFAMILY | DNA-binding domain | 44 | 103 | IPR016177 | GO:0003677(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Tan02g2020 | Tan-Chr2:89445874 | Tan11g0296 | Tan-Chr11:2356250 | 1.90E-30 | dispersed | |
Tan05g0842 | Tan-Chr5:6576367 | Tan02g2020 | Tan-Chr2:89445874 | 6.00E-30 | transposed | |
Tan08g1423 | Tan-Chr8:58148818 | Tan02g2020 | Tan-Chr2:89445874 | 1.60E-25 | transposed | |
Tan01g4974 | Tan-Chr1:115526265 | Tan02g2020 | Tan-Chr2:89445874 | 6.20E-50 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
26803 | PF00847 | AP2 | 1.20E-13 | CL0081 | Tan | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tan02g2020 | - | - | - | 0.0 |