Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2023 ATGGCGGACACCGGCTCGGTCTCCGACAAGAGAATGTCGTGTTCAATCCCCGAGAGGTTCCAGCTCCATGCTGCCATGTTGGCCTTGCAATTTGGCTATGCCGGTTTCCATGTCGTCTCTAGAGCTGCCCTCAACATGGGAATCAGTAAACTTGTCTTTCCAGTCTACCGAAACGTCATCGCTTTGCTCCTCCTCCTTCCCTTCGCATATTTCTTAGAGAAGAAGGATAGGCCTGCGCTCACTCTCAACTTTGTTCTTCAGTTCTTCCTCCTTGCTCTTGTTGGAATTACAGCAAATCAAGGGTTTTACTTGCTGGGTTTGGATAATACTTCTCCAACCTTTGCTTCTGCTATTCAGAATTCTGTTCCTGCCATTACTTTCCTTATGGCTGCACTTCTCAGGATTGAACAAGTGCGACTGAACCGGAAAGATGGGATAGCGAAGGTGGTGGGGACTCTATGCTGCGTGGCCGGAGCGACGGTGATCACATTATACAAAGGGCCGACCATCTACAGCCCGGCGACGACGGTGACGATGCAGGGGACGGCGGACACCGCTGGGATGCTGATGGGACCGGGAATGTTCCCATCGCTAGGCGACGCAAAGGGCAAAAGCTGGACCTTAGGGTGCGTGTACTTGATCGGCCACTGCTTGTCGTGGTCGGCGTGGCTGGTTCTGCAAGCTCCGGTGCTGAAAAAATACCCGGCTCGGCTCTCCGTCACGTCCTTCACTTGCTTCTTTGGCCTCATCCAATTCTTCATCATCGCCGCCGTCTTCGAGCGCGACGCTCAGGCTTGGCTCTTCCACTCTGGCGCAGAAGCTTTCAGTATTGTTTATGCGGGGGTGGTGGCTTCCGGGATAGCGTTTGCTGTACAGATATGGTGCATTGACAGAGGTGGCCCGGTTTTCGTTGCTGTCTACCAACCGGTTCAGACCTTCGTTGTTGCCGTTATGGCTTCCTTGGCTTTGGGCGAGGAGTTCTATTTGGGAGGGATCATAGGTGCGGTGCTGATTATATCGGGACTGTACTTTGTGCTGTGGGGCAAGAGCGAAGAAAAAAGGCTGTTATTGGAAAGGGCAGTGATCCAGTCCGCTCCGGACCACGGTAGCAGCAGAACAAGCGGCCACATCAAGCCGTCTCTTAACCAGCCACTCCTTCATCCTACGGCTGAAAATGTTTGA 1182 53.13 MADTGSVSDKRMSCSIPERFQLHAAMLALQFGYAGFHVVSRAALNMGISKLVFPVYRNVIALLLLLPFAYFLEKKDRPALTLNFVLQFFLLALVGITANQGFYLLGLDNTSPTFASAIQNSVPAITFLMAALLRIEQVRLNRKDGIAKVVGTLCCVAGATVITLYKGPTIYSPATTVTMQGTADTAGMLMGPGMFPSLGDAKGKSWTLGCVYLIGHCLSWSAWLVLQAPVLKKYPARLSVTSFTCFFGLIQFFIIAAVFERDAQAWLFHSGAEAFSIVYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAVMASLALGEEFYLGGIIGAVLIISGLYFVLWGKSEEKRLLLERAVIQSAPDHGSSRTSGHIKPSLNQPLLHPTAENV 393
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 89481846 89486804 - Tan0019086.1 Tan02g2023 744649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2023 393 Pfam EamA-like transporter family 27 163 IPR000620 GO:0016020(InterPro)
Tan02g2023 393 Pfam EamA-like transporter family 208 346 IPR000620 GO:0016020(InterPro)
Tan02g2023 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 252 351 - -
Tan02g2023 393 MobiDBLite consensus disorder prediction 366 393 - -
Tan02g2023 393 SUPERFAMILY Multidrug resistance efflux transporter EmrE 56 166 - -
Tan02g2023 393 PANTHER WAT1-RELATED PROTEIN 24 363 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2023 Tan-Chr2:89481846 Tan08g0778 Tan-Chr8:8136950 1.50E-62 dispersed
Tan01g4066 Tan-Chr1:105582941 Tan02g2023 Tan-Chr2:89481846 1.50E-60 transposed
Tan09g1858 Tan-Chr9:69866110 Tan02g2023 Tan-Chr2:89481846 2.00E-112 transposed
Tan01g4975 Tan-Chr1:115531171 Tan02g2023 Tan-Chr2:89481846 4.80E-165 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2023 - - - 0.0