Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2028 ATGGATCTACTGCGATCGGAGCCGATGCAATTGGTGCAGCTGATCATTCCTAATGAATCGGCGCACCGGACGATTTCCTACCTCGGCGACCTCGGTCTCTTCCAATTCAACGATCTCAATGCATCTAGAAGCCCATTCCAGCGGACGTATGCTGCTCAGATTAAAAGATGTGGAGAAATGGCTCGCAAGCTACGGTTTTTCAGGGAGCAAATGGCGAGGGCTGGTTTATCCCTGTCATCGCATTCTCTAGGGGTTCCTGATTTTAATCTGGATAATTTGGAGGTTAAACTTGGAGAATTTGAGTCAGAGTTGTTAGAGATCAATGGCAACAACGAGAAGTTACAACGCAACTATAGTGAGCTTTTGGAATATAAGCTTGTACTTCAGAAGGTCGGGGAGTTTTTCCATCTAGCTCAAAGCATAGCTGCAGCTCAGCAAAGAGAACTGGAAATGCAGCAAAACGGGGAAGGATCCATTAACAGTCCCTTATTATTGGAACAAGAAATGACAATGGATCCAACGAAACAAGTTAAACTAGGATATATCAGTGGTCTAGTTCCAAGAGAAAAGTCAATGGCTTTTGAAAGGATTTTGTTTCGTTCAACCAGGGGCAATGTGTATCTGAGGCAAGCTGTGGTTGACGGTTCCGTCACTGATCCTGTATCTGGGGAGAAGGTCGAGAAAAATGTGTTTGTCATATTCTATTCTGGAGAGAGAGCAAAGAATAAAATTCTGAAAATATGCGAAGCTTTTGGTGCAAACCGTTATCCATTCACTGATGACTTGGGCAAACAACTTCAGATGATTACAGAGGTGTCTGGAAAACTCTCTGAATTGAAGACTACCATTGATATGGGGAAACAGCACCGAAGTAAACTCTTGCAGACGATTGGCCATCAATATGAGCAGTGGAATCTTCTGGTAAAGAAGGAAAAGTCTGTTTACCACACTTTGAATATGCTCAGTGTTGACGTAACAAAGAAATGCCTTGTAGGTGAAGGTTGGTGTCCTGTTTTTGCAACAAATCAGCAGATTCAAAGGGTGATGCAGAAGGCTACCTTTGACAGCAAATCACAAATTGAGGCTATCTTTCATGTTTTGCAAACGAAGGATGCACCACCAACATATTTCCGCACAAACAAATTCACTTCTTCATTTCAAGAAATCGTAGATGCATATGGGGTTGCTAAGTATCAGGAAGCAAATCCTGGAGTCTACACGATTGTCACCTTCCCGTTCCTTTTTGCTGTAATGTTCGGTGATTGGGGTCATGGAATATGCTTGTTACTGGCAACATTATATTTTATAATAAGTGAGAAGAAATTTTCCAACCAGAAACTTGGAGATATCATTGAAATGACTTTTGGAGGCCGTTATGTTATCATGATGATGGCACTTTTTTCCATCTACACAGGATTTATTTATAATGAATTTTTTTCTGTCCCATTTGAACTGTTTGGACCTTCTGCATACGGTTGTCGTCATACTTCATGCAGGGATGCTACTACCATTGGTTTAATAAAGGTTCGTGATACATATCCATTTGGTGTTGACCCGAAGTGGCATGGCACTCGAAGTGAGTTACCTTTTCTCAACTCATTGAAGATGAAGATGTCTATCCTACTGGGAGTAGCTCAAATGAATCTCGGAATTATATTGAGCTACTTCAATGCGAAATTCTTCGGAGAAAACATTAACATCTGGTACCAATTTGTTCCACAGATGATATTCTTGAACAGCTTATTCGGTTACCTCTCACTTCTTATAATTGTAAAATGGTGCTCTGGATCCCAAGCTGATCTGTATCACGTAATGATTTATATGTTCTTGAGTCCTACAGATGATCTAGGTGAAAATCAGCTTTTTCCAGGACAGCAGTTTCTTCAGCTTCTGTTACTTCTGTCTGCCCTCGCTGCTGTGCCATGGATGTTGTTTCCCAAGCCTTTTCTGTTGAAGAAACAACATGAAGAAAGGCACCAAGGTCAATCCTACTCCGTACTTCACAGCACAGATGACAATCTTGAAACGAAACAACATCATGGTTCCCACGGCCATGAGGAGTTCGAGTTTAGCGAGGTCTTTGTACACCAACTTATACATACCATAGAGTTTGTACTTGGTGCAGTTTCTAACACAGCATCCTATCTACGTCTATGGGCCCTCAGTCTAGCCCATTCGGAGTTATCGAGTGTATTTTACGACAAGGTTCTACTCCTAGCTTGGGGGTTCAACAGTTGGATCATCCGAGCCGTAGGAATAGTCGTTTTTATATGTGCAACTGTTGGAGTTTTACTAATTATGGAAACTCTAAGCGCATTTCTGCACGCCTTGAGGCTCCACTGGGTGGAGTTTCAGAACAAATTCTATGCAGGAGATGGATTCAAATTTTCCCCCTTCTCGTTTTCGTTACTTCGGGAGGAGGAAGAGTGA 2430 41.98 MDLLRSEPMQLVQLIIPNESAHRTISYLGDLGLFQFNDLNASRSPFQRTYAAQIKRCGEMARKLRFFREQMARAGLSLSSHSLGVPDFNLDNLEVKLGEFESELLEINGNNEKLQRNYSELLEYKLVLQKVGEFFHLAQSIAAAQQRELEMQQNGEGSINSPLLLEQEMTMDPTKQVKLGYISGLVPREKSMAFERILFRSTRGNVYLRQAVVDGSVTDPVSGEKVEKNVFVIFYSGERAKNKILKICEAFGANRYPFTDDLGKQLQMITEVSGKLSELKTTIDMGKQHRSKLLQTIGHQYEQWNLLVKKEKSVYHTLNMLSVDVTKKCLVGEGWCPVFATNQQIQRVMQKATFDSKSQIEAIFHVLQTKDAPPTYFRTNKFTSSFQEIVDAYGVAKYQEANPGVYTIVTFPFLFAVMFGDWGHGICLLLATLYFIISEKKFSNQKLGDIIEMTFGGRYVIMMMALFSIYTGFIYNEFFSVPFELFGPSAYGCRHTSCRDATTIGLIKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVAQMNLGIILSYFNAKFFGENINIWYQFVPQMIFLNSLFGYLSLLIIVKWCSGSQADLYHVMIYMFLSPTDDLGENQLFPGQQFLQLLLLLSALAAVPWMLFPKPFLLKKQHEERHQGQSYSVLHSTDDNLETKQHHGSHGHEEFEFSEVFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNSWIIRAVGIVVFICATVGVLLIMETLSAFLHALRLHWVEFQNKFYAGDGFKFSPFSFSLLREEEE 809
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 89566271 89578183 - Tan0012302.2 Tan02g2028 744654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2028 809 PIRSF ATP6V0A1 1 809 IPR026028 GO:0000220(InterPro)|GO:0046961(InterPro)
Tan02g2028 809 PANTHER VACUOLAR PROTON ATPASES 1 808 IPR002490 GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:0051117(PANTHER)|GO:1902600(InterPro)
Tan02g2028 809 Coils Coil 90 117 - -
Tan02g2028 809 Pfam V-type ATPase 116kDa subunit family 27 801 IPR002490 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g0771 Tan-Chr2:7303841 Tan02g2028 Tan-Chr2:89566271 0.00E+00 dispersed
Tan02g2028 Tan-Chr2:89566271 Tan05g0297 Tan-Chr5:2214522 2.90E-305 dispersed
Tan02g2027 Tan-Chr2:89566271 Tan02g2028 Tan-Chr2:89566271 0.00E+00 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2028 K02154 - csv:101209817 1439.09