Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2063 ATGATTGGAGCACTAATCACCAGAGGACTCACGATGATTTTGGGCTATGCCTATCCTGCTTATGAGTGCTTCAAATCTGTCGAAACCAGCCAGCCAGAGATTGAGCAACTTCATTATTGGTGCCAATACTGGATTCTGGTGGCTATATTGACAATCCTCGAGAGAATTGGTGATTCTTTTATTTCATGGTTTCCGTTCTATAATGAAGCAAAGTTGGCATTCTTCGTTTATCTATGGCATCCAAAAACAAAGGGAGCGAACCATGTGTATGATTCGTTTTTCAGACCATATGTTTCAAAGCACGAGCCTCAAATTGACCGAAGCTTGTCGGAATTCAAGCTCAAGGCTAGTGATGCTGTATTTATCTACTTTCAAAGAGCTGCATCCTACTTTCAAACTACTTTGTTTGATGTATTTTCCAAGTTTGCTCATCCATCAACAACTCCTGCTGCTCCCAAGGTAACACGAAAAAGTATGATTTTCCTAATAACATTATTGGACTACACTAGTATATAG 516 39.73 MIGALITRGLTMILGYAYPAYECFKSVETSQPEIEQLHYWCQYWILVAILTILERIGDSFISWFPFYNEAKLAFFVYLWHPKTKGANHVYDSFFRPYVSKHEPQIDRSLSEFKLKASDAVFIYFQRAASYFQTTLFDVFSKFAHPSTTPAAPKVTRKSMIFLITLLDYTSI 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 90094186 90098673 + Tan0015538.3 Tan02g2063 744689

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2063 171 PANTHER HVA22-LIKE PROTEINS 13 118 IPR004345 -
Tan02g2063 171 Pfam TB2/DP1, HVA22 family 19 97 IPR004345 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2063 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2061 Tan-Chr2:90094186 Tan02g2063 Tan-Chr2:90094186 3.90E-87 dispersed
Tan02g2063 Tan-Chr2:90094186 Tan08g1654 Tan-Chr8:66475640 5.20E-39 dispersed
Tan02g2062 Tan-Chr2:90094186 Tan02g2063 Tan-Chr2:90094186 3.90E-87 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g172 . . . Bda08g00987 . Bpe12g00125 Bma05g00373 . Cmo19g00753 Cmo11g01746 . . . . . Cpe04g00598 Cpe15g00598 Bhi05g01707 Tan02g2063 . . Hepe02g0419 . . Cla02g00420 Cam02g0429 Cec02g0427 Cco02g0445 Clacu02g0430 Cmu02g0425 Cre02g0759 . . . . . Csa07g00108 . Cme01g01253 Blo04g00573 Blo13g00500 Bda15g01030 Bda14g00620 Bpe15g00808 . Bma03g00613 Bma08g00749 . . . Cma11g01375 Cma19g00744 . . . . . . . . . . . Cla02g01174 Cam02g1253 Cec02g1263 Cco02g1301 Clacu02g1235 Cmu02g1201 Cre02g1517 Lsi11g01207 . Chy01g00675 .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001694 1 2 2 1 3 2 4 2 2 2 2 2 4 2 1 4 2 4 3 2 2 2 2 2 2 2 2 3 3 2 69