Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2081 ATGGCGGCACGAATTTCGTTCTTGTTGGGTCTTTCTACTCTGCTGCTGTTGGTACCAGGTGGGTTTTCGACGAGTTTCACTTTTGTAAACAAATGTGGATTCACAGTCTGGCCGGGCGTTCTGTCGAACGGCGGCGTTCCGCCGCTTCCCACCACTGGCTTCTCTCTCCAGACCGAAGAGTCCAAGACACTGTCGGCGCCAGCGTCTTGGGGTGGCCGTTTCTGGGGCCGAACACTCTGTTCCGAAGATTCCACCGGGAAATTCACCTGCGCCACCGGCGATTGCGGCTCCAACAAACTCGAGTGCGCTGGAAGCGGAGCAACGCCGCCGGCGACTCTGGCGGAGTTCACTCTCGACGGCTCCGGCGGTCTTGATTTCTTCGATGTCAGCTTGGTGGACGGTTACAATCTTCCGATGATGGTGGTGCCTCAGGGCGGCTCCGGCGACAACTGCACGAGCACCGGCTGCGTGGTGGATCTGAACAGCGCGTGTCCGTCGGAGCTGCGCGTGACGAGCGGCGACGGGAGAGAGGGCGTCGCGTGTAAAAGCGCGTGTGATGCGTTCAACCAACCGCAGTATTGTTGCACGGGCGCGTACCAAACACCGGACACTTGTCAGCCGTCGATGTACTCTCAGATCTTCAAGAAAGCGTGCCCACGCGCTTATAGCTACGCGTACGATGATAAGACGAGCACTTTCACATGCGCCAGAGCTGATTACGTCATCACCTTCTGTCCATCGCCAAACACCAGCCAAAAGTCATCGGAGGCACAGAACTCACCGGCGACGGCGAACCCATCCTCCGGCGGCGACAGCGCGATGGTCTACGAAGGCGCTTCCTTGATCCAAACTGACACCGCGCCGCCGCGCGTGGCCGGAATTCCAGCGGTCGGTGCGGTGGCGATTTGGTGGTTGTGGCAGCAGCTGTTCTTCTACTTCTAA 942 59.13 MAARISFLLGLSTLLLLVPGGFSTSFTFVNKCGFTVWPGVLSNGGVPPLPTTGFSLQTEESKTLSAPASWGGRFWGRTLCSEDSTGKFTCATGDCGSNKLECAGSGATPPATLAEFTLDGSGGLDFFDVSLVDGYNLPMMVVPQGGSGDNCTSTGCVVDLNSACPSELRVTSGDGREGVACKSACDAFNQPQYCCTGAYQTPDTCQPSMYSQIFKKACPRAYSYAYDDKTSTFTCARADYVITFCPSPNTSQKSSEAQNSPATANPSSGGDSAMVYEGASLIQTDTAPPRVAGIPAVGAVAIWWLWQQLFFYF 313
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 90348461 90350869 + Tan0009790.1 Tan02g2081 744707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2081 313 FunFam THAUMATIN-LIKE PROTEIN 1 24 246 - -
Tan02g2081 313 SUPERFAMILY Osmotin, thaumatin-like protein 25 247 IPR037176 -
Tan02g2081 313 ProSiteProfiles Thaumatin family profile. 23 246 IPR001938 -
Tan02g2081 313 PRINTS Pathogenesis-related protein signature 236 245 IPR001938 -
Tan02g2081 313 PRINTS Pathogenesis-related protein signature 25 37 IPR001938 -
Tan02g2081 313 PRINTS Pathogenesis-related protein signature 125 141 IPR001938 -
Tan02g2081 313 PRINTS Pathogenesis-related protein signature 73 84 IPR001938 -
Tan02g2081 313 MobiDBLite consensus disorder prediction 249 270 - -
Tan02g2081 313 Pfam Thaumatin family 30 246 IPR001938 -
Tan02g2081 313 Gene3D Thaumatin 24 246 IPR037176 -
Tan02g2081 313 CDD TLP-PA 25 245 - -
Tan02g2081 313 PANTHER OS03G0233200 PROTEIN 15 246 IPR001938 GO:0005576(PANTHER)|GO:0006952(PANTHER)
Tan02g2081 313 SMART tha2 26 246 IPR001938 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2081 Tan-Chr2:90348461 Tan05g1161 Tan-Chr5:10679264 4.50E-97 dispersed
Tan02g2081 Tan-Chr2:90348461 Tan02g2082 Tan-Chr2:90348461 1.90E-148 tandem
Tan01g0004 Tan-Chr1:239332 Tan02g2081 Tan-Chr2:90348461 2.60E-78 transposed
Tan01g5033 Tan-Chr1:115914840 Tan02g2081 Tan-Chr2:90348461 2.80E-120 wgd
Tan02g2081 Tan-Chr2:90348461 Tan03g2089 Tan-Chr3:75777090 4.80E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2081 - - - 0.0