Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tan02g2119 ATGAGTGATGAACGCTCTGGATTGCGATTTAGCAACTCTTCTTGTTGCCTGAAGCGGAAAAGACCTCCCAAGATTGAGATTCCTAACGTCTTACAAGAGATTCGAGCTGAAAAACTTGAAGACGCCACTCCGCGAACCGATACCGTCTCTTCCGGCGGGAATGATTTTGCAGATCATGTGGGGGTTTTCTCCGTCAAGGGCAAGAAGAGGTTCATGGAAGATACTCACAAGATCATTCCTAGTTTGAAAGGCCACTTGAATGTTGCCTTTTTTGGCGTTTATGATGGCCATGGAGGCAGGAAGGCAGCGAAATTTGTTGCAGAAAATTTGCACAATAACATATTTGAAGTGGTGGGCAATTGCACGGGATCTGCAGAAAAGGAGGAAGCAATTAAAGCTGCTTTCTTGAAAACGGACCGAGACTTCTTGAATCTGGGTTTAGGCAGTGGTGCCTGCTGTGTCACAGCTCTGATACAAGGAGAAGAACTTGTTGTTTCCAATTTGGGAGACTGTAGGGCTGTTCTTTCCAGAGGCGGAGTAGCTGAAGCAGTAACAAGGGACCATAGAGTTGAACAGGAGGATGAACGGAAAAGAATAGAAAACAAGGGTGGATATGTTGAGATTCATAGGGGGGCATGGAGAGTTCATGGAGTTCTTTCTGTTTCTAGAAGCATTGGAGATGCTCATTTGAAGGACTGGGTGCTGGCAGAGCCTGATTCAAAGGTCCTACTTCTTAGTGAAGACATGGAATTTCTTGTTCTAGCCACTGATGGGCTATGGGAAAAGGTTGGAACCCAAGAGACTGTTGATGTGGTGACACGATTGAGGTTGATGGGTAAAAGTTTTGGGCTACCAAAAGGTTCCTTGAGAAGCATTAGCTATGCCCATTGCTCTGTGAATCCAAGTCCATCAAAACTACGGAGAGTTTCATTAGTCACGCAACCGAAAGTCGGGGTGGGCCAATCTCCAATCTGTGAGAAGGCAAGTGGTAGCTGTGAAGAAGGTGAATATGACTATTCTTGTGAAATTGAAAGTCCTGGATCAAAATCAAGGAGAATATCATTGGTCAGACATAGAAAGATGAAGACAGAATCTTCACCTAAGGAGAATAATGATTGCTATGTGAAGAGACCCACTTCCAGTGGACTTGTGGCTGCTTGTAAGGAACTTGTAGATCTAGCTCTGCGTAGGGGTAGTCTGGATGACATTACCGTAATGATAATCGACTTAAGCCACTTTAGGTACAAGAATCAATCTGAGAGTTCTTGCAACTTGTAA 1278 44.52 MSDERSGLRFSNSSCCLKRKRPPKIEIPNVLQEIRAEKLEDATPRTDTVSSGGNDFADHVGVFSVKGKKRFMEDTHKIIPSLKGHLNVAFFGVYDGHGGRKAAKFVAENLHNNIFEVVGNCTGSAEKEEAIKAAFLKTDRDFLNLGLGSGACCVTALIQGEELVVSNLGDCRAVLSRGGVAEAVTRDHRVEQEDERKRIENKGGYVEIHRGAWRVHGVLSVSRSIGDAHLKDWVLAEPDSKVLLLSEDMEFLVLATDGLWEKVGTQETVDVVTRLRLMGKSFGLPKGSLRSISYAHCSVNPSPSKLRRVSLVTQPKVGVGQSPICEKASGSCEEGEYDYSCEIESPGSKSRRISLVRHRKMKTESSPKENNDCYVKRPTSSGLVAACKELVDLALRRGSLDDITVMIIDLSHFRYKNQSESSCNL 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 90674721 90677825 + Tan0020312.1 Tan02g2119 744745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tan02g2119 425 ProSiteProfiles PPM-type phosphatase domain profile. 59 410 IPR001932 -
Tan02g2119 425 Pfam Protein phosphatase 2C 59 275 IPR001932 -
Tan02g2119 425 ProSitePatterns PPM-type phosphatase domain signature. 90 98 IPR000222 GO:0043169(InterPro)
Tan02g2119 425 PANTHER PROTEIN PHOSPHATASE 48 409 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Tan02g2119 425 Gene3D - 49 418 IPR036457 -
Tan02g2119 425 SMART PP2C_4 49 408 IPR001932 -
Tan02g2119 425 SUPERFAMILY PP2C-like 48 411 IPR036457 -
Tan02g2119 425 CDD PP2Cc 59 274 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Tan02g2119 Tan-Chr2:90674721 Tan08g2365 Tan-Chr8:75004998 4.90E-62 dispersed
Tan02g2119 Tan-Chr2:90674721 Tan02g2120 Tan-Chr2:90674721 2.40E-202 tandem
Tan06g0689 Tan-Chr6:5245633 Tan02g2119 Tan-Chr2:90674721 5.50E-36 transposed
Tan02g2119 Tan-Chr2:90674721 Tan04g1322 Tan-Chr4:13953942 6.80E-64 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tan02g2119 - - - 0.0